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Web server based software that estimates a variety of population genetic parameters and conducts a variety of sophisticated tests for departures from Hardy-Weinberg, population differentiation, and linkage disequilibrium. It also can convert data files to formats for use with other programs, including Arlequin. Because Genepop runs on the web, it is not operating system specific. If your interest is Wright'sF-statistics, Fstat, GDA, and TFPGA are recommended.

TFPGA genetic data analysis software

TFPGA, short for Tools for Population Genetic Analyses, is a program for the analysis of allozyme and molecular population genetic data that calculates descriptive statistics, genetic distances, F-statistics, and tests for Hardy-Weinberg equilibrium (see also Fstat and GDA). It also performs exact tests for genetic differentiation (see GenePop), Mantel tests (see GenAlEx and Permute!), and UPGMA cluster analyses (see GDA and Phylip).