Publications

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Book
S. Hendrix and Debinski, D. M., Butterflies in Your Pocket: A Guide to the Butterflies of the Upper Midwest. University of Iowa Press, 2003.
D. C. Adams, Ecological character displacement in Plethodon and methods for shape analysis of articulated structures. 1999.
D. M. Debinski and Pritchard, J., A field guide to butterflies of the Greater Yellowstone Ecosystem. Roberts Rinehart, 2002.
T. Wiegand and Moloney, K. A., Handbook of spatial point-pattern analysis in ecology. CRC Press, 2013.
J. Marie Serb, Intraspecific Phylogeographic Analysis of Kinosternon Flavescens and the Taxonomic Significance of the Illinois Mud Turtle, Kf Spooneri Smith 1951. 2000.
D. E. Soltis, Isozymes in plant biology. Springer Science & Business Media, 2012.
M. S. Rosenberg, Adams, D. C., and Gurevitch, J., MetaWin: statistical software for meta-analysis. Sinauer Associates Sunderland, Massachusetts, USA, 2000.
J. Greilhuber, Dolezel, J., Leitch, I. J., and Wendel, J. F., Plant Genome Diversity: Vol. 1: Plant Genomes, Their Residents, and Their Evolutionary Dynamics. Springer, 2012.
I. J. Leitch, Greilhuber, J., Dolezel, J., and Wendel, J. F., Plant Genome Diversity Volume 2: Physical Structure, Behaviour and Evolution of Plant Genomes, vol. 2. Springer Science & Business Media, 2012.
J. M. Serb and Harris, J. Lowrey, Taxonomic Status of the Endangered Winged Mapleleaf Quadrula Fragosa (Conrad, 1835) in Arkansas Using Mitochondrial DNA Sequence of the ND1 Gene: Final Report. 2003.
Book Chapter
D. M. Debinski and Brussard, P. F., Biological diversity assessment in Glacier National Park, Montana: I. sampling design, in Ecological indicators, Springer, 1992, pp. 393-407.
D. C. Adams and Naylor, G. J. P., A Comparison of Methods for Assessing the Structural Similarity of Proteins, in Mathematical Methods for Protein Structure Analysis and Design, Springer Berlin Heidelberg, 2003, pp. 109-115.
K. A. Moloney, Determining process through pattern: reality or fantasy?, in Patch Dynamics, Springer Berlin Heidelberg, 1993, pp. 61-69.
D. C. Adams, Divergence of trophic morphology and resource use among populations of Plethodon cinereus and P. hoffmani in Pennsylvania, in The biology of Plethodontid salamanders, Springer US, 2000, pp. 383-394.
J. F. Wendel, Brubaker, C., Álvarez, I., Cronn, R., and Stewart, J. McD., Evolution and natural history of the cotton genus, in Genetics and genomics of cotton, Springer US, 2009, pp. 3-22.
N. F. Weeden and Wendel, J. F., Genetics of plant isozymes, in Isozymes in plant biology, Springer Netherlands, 1989, pp. 46-72.
J. F. Wendel, Genome evolution in polyploids, in Plant molecular evolution, Springer Netherlands, 2000, pp. 225-249.
J. Greilhuber and Leitch, I. J., Genome size and the phenotype, in Plant Genome Diversity Volume 2, Springer Vienna, 2013, pp. 323-344.
B. J. Wilsey, Importance of species replication in understanding plant invasions into North American grasslands, in Invasive Plants: Ecological and Agricultural Aspects, Birkhäuser Basel, 2005, pp. 61-75.
J. L. Hamrick, Murawski, D. A., and Nason, J. D., The influence of seed dispersal mechanisms on the genetic structure of tropical tree populations, in Frugivory and seed dispersal: ecological and evolutionary aspects, Springer Netherlands, 1993, pp. 281-297.
J. F. Wendel, Flagel, L. E., and Adams, K. L., Jeans, genes, and genomes: cotton as a model for studying polyploidy, in Polyploidy and genome evolution, Springer Berlin Heidelberg, 2012, pp. 181-207.
R. Whitkus, Doebley, J., and Wendel, J. F., Nuclear DNA markers in systematics and evolution, in DNA-based markers in plants, Springer Netherlands, 1994, pp. 116-141.
J. F. Wendel, Brubaker, C. L., and Seelanan, T., The origin and evolution of Gossypium, in Physiology of cotton, Springer Netherlands, 2010, pp. 1-18.
J. F. Wendel and Doyle, J. J., Phylogenetic incongruence: window into genome history and molecular evolution, in Molecular systematics of plants II, Springer US, 1998, pp. 265-296.
M. L. Ainouche and Wendel, J. F., Polyploid speciation and genome evolution: Lessons from recent allopolyploids, in Evolutionary Biology: Genome Evolution, Speciation, Coevolution and Origin of Life, Springer International Publishing, 2014, pp. 87-113.
, Proceedings of the Rome Geometric Morphometric Workshop. Homage to Leslie F. Marcus, in Special Publication of the Italian Journal of Zoology, vol. 71, no. 1, Mucchi Editore, 2004, pp. 1-88.
R. D. Holt and Debinski, D. M., Reflections on landscape experiments and ecological theory: tools for the study of habitat fragmentation, in How Landscapes Change, Springer, 2003, pp. 201-223.
K. L. Adams, Flagel, L., and Wendel, J. F., Responses of the cotton genome to polyploidy, in Genetics and Genomics of Cotton, Springer US, 2009, pp. 419-429.
F. Jeltsch and Moloney, K. A., Spatially explicit vegetation models: what have we learned?, in Progress in Botany, Springer Berlin Heidelberg, 2002, pp. 326-343.
J. Bohórquez-Herrera, Aurioles-Gamboa, D., Hernandez-Camacho, C., and Adams, D. C., Variability in the Skull Morphology of Adult Male California Sea Lions and Galapagos Sea Lions, in Tropical pinnipeds: Bio-ecology, threats and conservation, CRC Press, 2017, pp. 22-49.
Conference Proceedings
J. M. Serb, Omilian, A., and Oakley, T. H., Ancient duplication of Pax-6 homologs eyeless (ey) and twin of eyeless (toy), INTEGRATIVE AND COMPARATIVE BIOLOGY, vol. 43, no. 6. SOC INTEGRATIVE COMPARATIVE BIOLOGY 1313 DOLLEY MADISON BLVD, NO 402, MCLEAN, VA 22101 USA, pp. 992-992, 2003.
J. M. Serb, Zhang, X., and Greenlee, W. M. H., Applying Seed Networks to Genomic Data in an EvoDevo Context: A New Analysis Tool, INTEGRATIVE AND COMPARATIVE BIOLOGY, vol. 52. OXFORD UNIV PRESS INC JOURNALS DEPT, 2001 EVANS RD, CARY, NC 27513 USA, pp. E157-E157, 2012.
A. C. Kraemer, Serb, J. M., and Adams, D. C., Coevolution of Coloration and Conspicuousness in a Batesian Mimic, INTEGRATIVE AND COMPARATIVE BIOLOGY, vol. 54. OXFORD UNIV PRESS INC JOURNALS DEPT, 2001 EVANS RD, CARY, NC 27513 USA, pp. E114-E114, 2014.
A. N. Pairett and Serb, J. M., Comparative transcriptomics: A study using the mirror eye of the scallop, Argopecten irradians, INTEGRATIVE AND COMPARATIVE BIOLOGY, vol. 51. OXFORD UNIV PRESS INC JOURNALS DEPT, 2001 EVANS RD, CARY, NC 27513 USA, pp. E234-E234, 2011.
A. J. Krause and Serb, J. M., Functional divergence? Comparing opsin expression in extra-ocular tissues and eyes of the scallop (Pectinidae)., INTEGRATIVE AND COMPARATIVE BIOLOGY, vol. 53. OXFORD UNIV PRESS INC JOURNALS DEPT, 2001 EVANS RD, CARY, NC 27513 USA, pp. E116-E116, 2013.
M. D. Edwards, Stuber, C. W., and Wendel, J. F., THE GENETIC-BASIS OF QUANTITATIVE TRAITS-EVIDENCE FROM AN EXPERIMENTAL MAIZE POPULATION, AMERICAN JOURNAL OF BOTANY, vol. 72, no. 6. BOTANICAL SOC AMER INC OHIO STATE UNIV-DEPT BOTANY 1735 NEIL AVE, COLUMBUS, OH 43210, pp. 875-876, 1985.
M. L. Ainouche and Wendel, J. F., Genome technologies, polyploidy and evolution, Ecole thématique CNRS “High-throughput molecular biology methods in the environmental sciences”. 2005.
A. N. Pairett and Serb, J. M., Identifying the molecular link between photosensitive tissues and the eyes of the bay scallop, Argopecten irradians., INTEGRATIVE AND COMPARATIVE BIOLOGY, vol. 54. OXFORD UNIV PRESS INC JOURNALS DEPT, 2001 EVANS RD, CARY, NC 27513 USA, pp. E159-E159, 2014.
M. E. Jakubauskas, Debinski, D., and Kindscher, K., Integration of multispectral and ecological data for characterizing montane meadow communities in the Greater Yellowstone Ecosystem, Geoscience and Remote Sensing Symposium, 1996. IGARSS'96.'Remote Sensing for a Sustainable Future.', International, vol. 4. IEEE, pp. 2300-2302, 1996.
J. F. Wendel, Jeans, Genes, and The Independent Domestications Of Cotton, Plant and Animal Genome XXI Conference. Plant and Animal Genome, 2013.
E. Sherratt, Adams, D. C., and Serb, J. M., Macroevolution, phylomorphospace and directional evolution in recessing scallops, INTEGRATIVE AND COMPARATIVE BIOLOGY, vol. 55. OXFORD UNIV PRESS INC JOURNALS DEPT, 2001 EVANS RD, CARY, NC 27513 USA, pp. E166-E166, 2015.
J. M. Jandt, Suryanarayanan, S., Hermanson, J. C., Jeanne, R. L., and Toth, A. L., Maternal and nourishment factors interact to influence offspring developmental trajectories in social wasps, Proc. R. Soc. B, vol. 284, no. 1857. The Royal Society, p. 20170651, 2017.
D. Ashlock, Adams, D. C., and Doty, D., Morphometric grayscale texture analysis using foot patterns, Evolutionary Computation, 2003. CEC'03. The 2003 Congress on, vol. 3. IEEE, pp. 1575-1581, 2003.
J. F. Wendel, Edwards, M. D., and Stuber, C. W., MULTILOCUS GENETIC-CONTROL OF PREFERENTIAL FERTILIZATION IN ZEA-MAYS-L, AMERICAN JOURNAL OF BOTANY, vol. 74, no. 5. BOTANICAL SOC AMER INC OHIO STATE UNIV-DEPT BOTANY 1735 NEIL AVE, COLUMBUS, OH 43210, pp. 671-671, 1987.
E. C. Fricke, Tewksbury, J. J., Wandrag, E. M., and Rogers, H. S., Mutualistic strategies minimize coextinction in plant–disperser networks, Proc. R. Soc. B, vol. 284, no. 1854. The Royal Society, p. 20162302, 2017.
J. M. Serb and Puslednik, L., Phylogenetic relationships of the pectinidae and the evolution of sexual reproductive modes: How important is dispersal life history?, JOURNAL OF SHELLFISH RESEARCH, vol. 26, no. 4. NATL SHELLFISHERIES ASSOC C/O DR. SANDRA E. SHUMWAY, UNIV CONNECTICUT, 1080 SHENNECOSSETT RD, GROTON, CT 06340 USA, pp. 1344-1345, 2007.
J. M. Serb and Oakley, T. H., Reconciled phylogenetic trees as an emerging analytical framework for evolutionary developmental biology, INTEGRATIVE AND COMPARATIVE BIOLOGY, vol. 44, no. 6. SOC INTEGRATIVE COMPARATIVE BIOLOGY 1313 DOLLEY MADISON BLVD, NO 402, MCLEAN, VA 22101 USA, pp. 639-639, 2004.
A. J. Krause, Pairett, A. N., and Serb, J. M., The role of gene duplication and convergence in the molecular evolution of scallop opsins, INTEGRATIVE AND COMPARATIVE BIOLOGY, vol. 51. OXFORD UNIV PRESS INC JOURNALS DEPT, 2001 EVANS RD, CARY, NC 27513 USA, pp. E73-E73, 2011.
H. Twyman, Valenzuela, N., Literman, R., Andersson, S., and Mundy, N. I., Seeing red to being red: conserved genetic mechanism for red cone oil droplets and co-option for red coloration in birds and turtles, Proc. R. Soc. B, vol. 283, no. 1836. The Royal Society, p. 20161208, 2016.
M. M. Cerney and Adams, D. C., Sequestering Size: The Role of Allometry and Gender in Digital Human Modeling, Proceedings of the SAE Digital Human Modeling Conference. pp. 2004-04DHM-38, 2004.

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