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GeneClass 1 & 2

GeneClass2, short for Genetic Classification, is a program employing multilocus genotypes to select or exclude populations as origins of individuals. Functions include the assignment of individuals to populations and detection of migrants (see also Structure and WhichRun). This command-line program is available for Linux and Windows.

Structure Software for Population Genetics Inference

Structure is a software package for using multi-locus genotype data to infer the presence of distinct populations, assigning individuals to populations, studying hybrid zones, identifying migrants and admixed individuals, and estimating population allele frequencies in situations where many individuals are migrants or admixed. It can be applied to most of the commonly-used genetic markers, including allozymes, microsatellites, RFLPs and SNPs.