Publications
, “Tradeoffs and coexistence in fluctuating environments: evidence for a key dispersal-fecundity tradeoff in five nonpollinating fig wasps”, American Naturalist, vol. 186, pp. 151-158, 2015.
, “Proceedings of the Rome Geometric Morphometric Workshop. Homage to Leslie F. Marcus”, in Special Publication of the Italian Journal of Zoology, vol. 71, no. 1, Mucchi Editore, 2004, pp. 1-88.
, “Location‐specific sympatric morphological divergence as a possible response to species interactions in West Virginia Plethodon salamander communities”, Journal of Animal Ecology, vol. 76, no. 2, pp. 289-295, 2007.
, “Geometric morphometrics: ten years of progress following the ‘revolution’”, Italian Journal of Zoology, vol. 71, no. 1, pp. 5-16, 2004.
, “Assessing trait covariation and morphological integration on phylogenies using evolutionary covariance matrices”, PloS one, vol. 9, no. 4, p. e94335, 2014.
, “A general framework for the analysis of phenotypic trajectories in evolutionary studies”, Evolution, vol. 63, no. 5, pp. 1143-1154, 2009.
, “Historical explanations of phenotypic variation in the plethodontid salamander Gyrinophilus porphyriticus”, Herpetologica, pp. 353-364, 2001.
, “Methods for shape analysis of landmark data from articulated structures”, Evolutionary Ecology Research, vol. 1, no. 8, pp. 959-970, 1999.
, “Quantifying and comparing phylogenetic evolutionary rates for shape and other high-dimensional phenotypic data”, Systematic biology, p. syt105, 2013.
, “Evaluating modularity in morphometric data: challenges with the RV coefficient and a new test measure”, Methods in Ecology and Evolution, 2015.
, “A phylogenetic comparative method for evaluating trait coevolution across two phylogenies for sets of interacting species”, Evolution, 2017.
, “An" audience effect" for ecological terminology: use and misuse of jargon”, Oikos, pp. 632-636, 1997.
, “Comparing evolutionary rates for different phenotypic traits on a phylogeny using likelihood”, Systematic biology, p. sys083, 2012.
, “Phylogenetic anova: group‐clade aggregation, biological challenges, and a refined permutation procedure”, Evolution, 2018.
, “A Comparison of Methods for Assessing the Structural Similarity of Proteins”, in Mathematical Methods for Protein Structure Analysis and Design, Springer Berlin Heidelberg, 2003, pp. 109-115.
, “A Possible Case of Character Displacement”, The Biology of Plethodontid Salamanders, p. 383, 2000.
, “Responses of the cotton genome to polyploidy”, in Genetics and Genomics of Cotton, Springer US, 2009, pp. 419-429.
, “Review of: Morphology, Shape and Phylogeny”, Biometrics, vol. 58, pp. 694-695, 2002.
, “Phylogenetic meta‐analysis”, Evolution, vol. 62, no. 3, pp. 567-572, 2008.
, “Novel patterns of gene expression in polyploid plants”, TRENDS in Genetics, vol. 21, no. 10, pp. 539-543, 2005.
, “Exploring the genomic mysteries of polyploidy in cotton”, Biological Journal of the Linnean Society, vol. 82, no. 4, pp. 573-581, 2004.
, “Using randomization techniques to analyse behavioural data”, Animal Behaviour, vol. 51, no. 4, pp. 733-738, 1996.
, “Amphibians do not follow Bergmann's rule”, Evolution, vol. 62, no. 2, pp. 413-420, 2008.
, “A new method for evaluating the structural similarity of proteins using geometric morphometrics”, Currents in computational molecular biology). Universal Academy Press, Tokyo, 2000.
, “Natural History Constrains the Macroevolution of Foot Morphology in European Plethodontid Salamanders”, The American Naturalist, vol. 190, no. 2, pp. 000-000, 2017.
, “Divergence of trophic morphology and resource use among populations of Plethodon cinereus and P. hoffmani in Pennsylvania”, in The biology of Plethodontid salamanders, Springer US, 2000, pp. 383-394.
, “Ontogenetic convergence and evolution of foot morphology in European cave salamanders (Family: Plethodontidae)”, BMC Evolutionary Biology, vol. 10, no. 1, p. 216, 2010.
, “Review of: Sampling and Statistical Methods for Behavioral Ecologists”, Quarterly Review of Biology, vol. 75, p. 76, 2000.
, “geomorph: an R package for the collection and analysis of geometric morphometric shape data”, Methods in Ecology and Evolution, vol. 4, no. 4, pp. 393-399, 2013.
, “Organ-specific silencing of duplicated genes in a newly synthesized cotton allotetraploid”, Genetics, vol. 168, no. 4, pp. 2217-2226, 2004.
, “The evolution of large‐scale body size clines in Plethodon salamanders: evidence of heat‐balance or species‐specific artifact?”, Ecography, vol. 34, no. 6, pp. 1067-1075, 2011.
, “Parallel evolution of character displacement driven by competitive selection in terrestrial salamanders”, BMC Evolutionary Biology, vol. 10, no. 1, p. 72, 2010.
, “Multivariate Phylogenetic Comparative Methods: Evaluations, Comparisons, and Recommendations”, Systematic Biology, 2017.
, “Resampling tests for meta-analysis of ecological data”, Ecology, vol. 78, no. 4, pp. 1277-1283, 1997.
, “Polyploidy and genome evolution in plants”, Current opinion in plant biology, vol. 8, no. 2, pp. 135-141, 2005.
, “A METHOD FOR ASSESSING PHYLOGENETIC LEAST SQUARES MODELS FOR SHAPE AND OTHER HIGH‐DIMENSIONAL MULTIVARIATE DATA”, Evolution, vol. 68, no. 9, pp. 2675-2688, 2014.
, “Morphometrics and phylogenetics: principal components of shape from cranial modules are neither appropriate nor effective cladistic characters”, Journal of Human Evolution, vol. 60, no. 2, pp. 240-243, 2011.
, “Allele-specific, bidirectional silencing of an alcohol dehydrogenase gene in different organs of interspecific diploid cotton hybrids”, Genetics, vol. 171, no. 4, pp. 2139-2142, 2005.
, “A field comes of age: geometric morphometrics in the 21st century”, Hystrix, the Italian journal of Mammalogy, vol. 24, no. 1, pp. 7-14, 2013.
, “On the comparison of the strength of morphological integration across morphometric datasets”, Evolution, 2016.
, “Analysis of character divergence along environmental gradients and other covariates”, Evolution, vol. 61, no. 3, pp. 510-515, 2007.
, “Quantitative genetics and evolution of head shape in Plethodon salamanders”, Evolutionary Biology, vol. 38, no. 3, pp. 278-286, 2011.
, “Package ‘geomorph’: Geometric morphometric analysis of 2d/3d landmark data”, R package version, vol. 1, 2012.
, “Permutation tests for phylogenetic comparative analyses of high‐dimensional shape data: What you shuffle matters”, Evolution, vol. 69, no. 3, pp. 823-829, 2015.
, “Quantifying biomechanical motion using Procrustes motion analysis”, Journal of biomechanics, vol. 40, no. 2, pp. 437-444, 2007.
, “Plethodon hoffmani (Valley and Ridge Salamander). Predation”, Herpetological Review, vol. 30, p. 160, 1999.
, “Character displacement via aggressive interference in Appalachian salamanders”, Ecology, vol. 85, no. 10, pp. 2664-2670, 2004.
, “Ecological character displacement in Plethodon: biomechanical differences found from a geometric morphometric study”, Proceedings of the National Academy of Sciences, vol. 97, no. 8, pp. 4106-4111, 2000.
, “Genes duplicated by polyploidy show unequal contributions to the transcriptome and organ-specific reciprocal silencing”, Proceedings of the National Academy of Sciences, vol. 100, no. 8, pp. 4649-4654, 2003.
, “A generalized K statistic for estimating phylogenetic signal from shape and other high-dimensional multivariate data”, Systematic biology, vol. 63, no. 5, pp. 685-697, 2014.