Publications
“Candidate Gene Identification of Flowering Time Genes in Cotton”, The Plant Genome, 2015.
, “A Cluster of Recently Inserted Transposable Elements Associated with siRNAs in”, The Plant Genome, 2015.
, “Gene-Expression Novelty in Allopolyploid Cotton: A Proteomic Perspective”, Genetics, vol. 200, no. 1, pp. 91-104, 2015.
, , “Gossypium anapoides (Malvaceae), a new species from Western Australia”, Novon, vol. 23, no. 4, pp. 447-451, 2015.
, “Multiple rounds of ancient and recent hybridizations have occurred within the Aegilops–Triticum complex”, New Phytologist, 2015.
, “Persistence of Subgenomes in Paleopolyploid Cotton after 60 My of Evolution”, Molecular biology and evolution, vol. 32, no. 4, pp. 1063-1071, 2015.
, “Re-evaluating the phylogeny of allopolyploid Gossypium L”, Molecular Phylogenetics and Evolution, 2015.
, “Re-evaluating the phylogeny of allopolyploid Gossypium L.”, Molecular phylogenetics and evolution, vol. 92, pp. 45-52, 2015.
, “A re‐evaluation of the homoploid hybrid origin of Aegilops tauschii, the donor of the wheat D‐subgenome”, New Phytologist, 2015.
, “Taxonomy and Evolution of the Cotton Genus, Gossypium”, Cotton, no. agronmonogr57, 2015.
, “A Transcriptome Profile for Developing Seed of Polyploid Cotton”, The Plant Genome, vol. 8, no. 1, 2015.
, “Unraveling the fabric of polyploidy”, Nature Biotechnology, vol. 33, no. 5, pp. 491-493, 2015.
, “Unraveling the fabric of polyploidy”, Nature biotechnology, vol. 33, no. 5, pp. 491-493, 2015.
, “Ancient gene duplicates in Gossypium (Cotton) exhibit near-complete expression divergence”, Genome biology and evolution, vol. 6, no. 3, pp. 559-571, 2014.
, “CenH3 evolution in diploids and polyploids of three angiosperm genera”, BMC plant biology, vol. 14, no. 1, p. 383, 2014.
, , , “Contemporary and future studies in plant speciation, morphological/floral evolution and polyploidy: honouring the scientific contributions of Leslie D. Gottlieb to plant evolutionary biology”, Philosophical Transactions of the Royal Society B: Biological Sciences, vol. 369, no. 1648, p. 20130341, 2014.
, “Cytonuclear evolution of rubisco in four allopolyploid lineages”, Molecular biology and evolution, vol. 31, no. 10, pp. 2624-2636, 2014.
, “Doubling down on genomes: polyploidy and crop plants”, American journal of botany, vol. 101, no. 10, pp. 1711-1725, 2014.
, “Drivers and dynamics of diversity in plant genomes”, New Phytologist, vol. 202, no. 1, pp. 15-18, 2014.
, “Genome-wide disruption of gene expression in allopolyploids but not hybrids of rice subspecies”, Molecular biology and evolution, vol. 31, no. 5, pp. 1066-1076, 2014.
, , “The legacy of diploid progenitors in allopolyploid gene expression patterns”, Philosophical Transactions of the Royal Society B: Biological Sciences, vol. 369, no. 1648, p. 20130354, 2014.
, “Molecular confirmation of species status for the allopolyploid cotton species, Gossypium ekmanianum Wittmack”, Genetic Resources and Crop Evolution, vol. 62, no. 1, pp. 103-114, 2014.
, “Polyploid speciation and genome evolution: Lessons from recent allopolyploids”, in Evolutionary Biology: Genome Evolution, Speciation, Coevolution and Origin of Life, Springer International Publishing, 2014, pp. 87-113.
, “Proteomics profiling of fiber development and domestication in upland cotton (Gossypium hirsutum L.)”, Planta, vol. 240, no. 6, pp. 1237-1251, 2014.
, “A bountiful harvest: genomic insights into crop domestication phenotypes”, Annual Review of Plant Biology, vol. 64, pp. 47-70, 2013.
, “Composition and expression of conserved microRNA genes in diploid cotton (Gossypium) species”, Genome biology and evolution, vol. 5, no. 12, pp. 2449-2459, 2013.
, “Crop plants as models for understanding plant adaptation and diversification”, Frontiers in plant science, vol. 4, 2013.
, “Dynamics of duplicated gene expression in Polyploid Cotton”, Polyploid and hybrid genomics, pp. 187-194, 2013.
, “Genetic and epigenetic aspects of polyploid evolution in plants”, Cytogenetic and genome research, vol. 140, no. 2-4, pp. 270-285, 2013.
, “Homoeolog expression bias and expression level dominance in allopolyploid cotton”, Heredity, vol. 110, no. 2, pp. 171-180, 2013.
, “Insights into the evolution of cotton diploids and polyploids from whole-genome re-sequencing”, G3: Genes| Genomes| Genetics, vol. 3, no. 10, pp. 1809-1818, 2013.
, “Jeans, Genes, and The Independent Domestications Of Cotton”, Plant and Animal Genome XXI Conference. Plant and Animal Genome, 2013.
, “Proteomic profiling of developing cotton fibers from wild and domesticated Gossypium barbadense”, New Phytologist, vol. 200, no. 2, pp. 570-582, 2013.
, “Assessing the monophyly of polyploid Gossypium species”, Plant systematics and evolution, vol. 298, no. 6, pp. 1177-1183, 2012.
, “The cytonuclear dimension of allopolyploid evolution: an example from cotton using rubisco”, Molecular biology and evolution, vol. 29, no. 10, pp. 3023-3036, 2012.
, “Duplicate gene evolution, homoeologous recombination, and transcriptome characterization in allopolyploid cotton”, BMC genomics, vol. 13, no. 1, p. 302, 2012.
, “Homoeolog expression bias and expression level dominance in allopolyploids”, New Phytologist, vol. 196, no. 4, pp. 966-971, 2012.
, “Jeans, genes, and genomes: cotton as a model for studying polyploidy”, in Polyploidy and genome evolution, Springer Berlin Heidelberg, 2012, pp. 181-207.
, Plant Genome Diversity: Vol. 1: Plant Genomes, Their Residents, and Their Evolutionary Dynamics. Springer, 2012.
, Plant Genome Diversity Volume 2: Physical Structure, Behaviour and Evolution of Plant Genomes, vol. 2. Springer Science & Business Media, 2012.
, “Repeated polyploidization of Gossypium genomes and the evolution of spinnable cotton fibres”, Nature, vol. 492, no. 7429, pp. 423-427, 2012.
, “Targeted capture of homoeologous coding and noncoding sequence in polyploid cotton”, G3: Genes| Genomes| Genetics, vol. 2, no. 8, pp. 921-930, 2012.
, “Targeted sequence capture as a powerful tool for evolutionary analysis1”, American journal of botany, vol. 99, no. 2, pp. 312-319, 2012.
, “Genomically biased accumulation of seed storage proteins in allopolyploid cotton”, Genetics, vol. 189, no. 3, pp. 1103-1115, 2011.
, “The hairy problem of epigenetics in evolution”, New Phytologist, vol. 191, no. 1, pp. 7-9, 2011.
, “Parallel up-regulation of the profilin gene family following independent domestication of diploid and allopolyploid cotton (Gossypium)”, Proceedings of the National Academy of Sciences, vol. 108, no. 52, pp. 21152-21157, 2011.
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