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Journal Article

J. A. Eccard, Dean, W. R. J., Wichmann, M. C., Huttunen, S. M., Eskelinen, E., Moloney, K. A., and Jeltsch, F., “Use of large Acacia trees by the cavity dwelling Black-tailed Tree Rat in the Southern Kalahari”, Journal of arid environments, vol. 64, no. 4, pp. 604-615, 2006.

A. M. Sparkman, Chism, K. R., Bronikowski, A. M., Brummett, L. J., Combrink, L. L., Davis, C. L., Holden, K. G., Kabey, N. M., and Miller, D. A. W., “Use of field‐portable ultrasonography reveals differences in developmental phenology and maternal egg provisioning in two sympatric viviparous snakes”, Ecology and Evolution, 2018.

S. Altenbach, Anderson, O., Bigwood, D., Cantinhour, S., Coe, E., Datko, A., Heller, S., Kaleikau, E., McCouch, S., and Kohel, R., “USDA plant genome research program”, ADVANCES IN AGRONOMY, VOL 55, vol. 55, pp. 113-166, 1995.

B. J. Wilsey, “Urea additions and defoliation affect plant responses to elevated CO2 in a C3 grass from Yellowstone National Park”, Oecologia, vol. 108, no. 2, pp. 321-327, 1996.

J. F. Wendel, Schnabel, A., and Seelanan, T., “An unusual ribosomal DNA sequence from Gossypium gossypioides reveals ancient, cryptic, intergenomic introgression”, Molecular phylogenetics and evolution, vol. 4, no. 3, pp. 298-313, 1995.

J. W. Dalling, Winter, K., Nason, J. D., Hubbell, S. P., Murawski, D. A., and Hamrick, J. L., “The unusual life history of Alseis blackiana: a shade-persistent pioneer tree?”, Ecology, vol. 82, no. 4, pp. 933-945, 2001.

R. A. Moranz, Debinski, D. M., McGranahan, D. A., Engle, D. M., and Miller, J. R., “Untangling the effects of fire, grazing, and land-use legacies on grassland butterfly communities”, Biodiversity and Conservation, vol. 21, no. 11, pp. 2719-2746, 2012.

A. H. Paterson and Wendel, J. F., “Unraveling the fabric of polyploidy”, Nature biotechnology, vol. 33, no. 5, pp. 491-493, 2015.

A. H. Paterson and Wendel, J. F., “Unraveling the fabric of polyploidy”, Nature Biotechnology, vol. 33, no. 5, pp. 491-493, 2015.

Y. Bao, Hu, G., Grover, C. E., Conover, J., Yuan, D., and Wendel, J. F., “Unraveling cis and trans regulatory evolution during cotton domestication”, Nature Communications, vol. 10, no. 1, pp. 1-12, 2019.

J. W. Rice, Clough, M. P., Olson, J. K., Adams, D. C., and Colbert, J. T., “University faculty and their knowledge & acceptance of biological evolution”, Evolution: Education and Outreach, vol. 8, no. 1, p. 8, 2015.

J. W. Raich, “Understory palms as nutrient traps: A hypothesis.”, Brenesia. San Jose, no. 21, pp. 119-129, 1983.

A. Schnabel, Nason, J. D., and Hamrick, J. L., “Understanding the population genetic structure of Gleditsia triacanthos L.: seed dispersal and variation in female reproductive success”, Molecular Ecology, vol. 7, no. 7, pp. 819-832, 1998.

M. Condon, Adams, D. C., Bann, D., Flaherty, K., Gammons, J., Johnson, J., Lewis, M. L., Marsteller, S., Scheffer, S. J., and Serna, F., “Uncovering tropical diversity: six sympatric cryptic species of Blepharoneura (Diptera: Tephritidae) in flowers of Gurania spinulosa (Cucurbitaceae) in eastern Ecuador”, Biological Journal of the Linnean Society, vol. 93, no. 4, pp. 779-797, 2008.

J. M. Serb, Porath-Krause, A. J., and Pairett, A. N., “Uncovering a gene duplication of the photoreceptive protein, opsin, in scallops (bivalvia: Pectinidae)”, Integrative and comparative biology, p. ict063, 2013.

R. E. Hanson, M Islam-Faridi, N., Crane, C. F., Zwick, M. S., Czeschin, D. G., Wendel, J. F., McKnight, T. D., H Price, J., and Stelly, D. M., “Ty1-copia-retrotransposon behavior in a polyploid cotton”, Chromosome Research, vol. 8, no. 1, pp. 73-76, 2000.

D. A. N. I. E. L. E. F. PARMA, PIANISSOLA, E. V. A. N. D. R. O. M., VINÍCIUS-SILVA, R. O. N. A. L. D. O., Clark, L. G., and SANTOS-GONÇALVES, A. N. A. P. A. U. L. A., “Two new species of Merostachys (Poaceae: Bambusoideae) from the Brazilian Atlantic forest”, Phytotaxa, vol. 267, no. 3, pp. 219-227, 2016.

E. V. A. N. D. R. O. M. A. C. H. A. D. O. PIANISSOLA, PARMA, D. A. N. I. E. L. E. F. R. E. I. T. A. S., GONÇALVES, A. N. A. P. A. U. L. A. S. A. N. T., and CLARK, L. Y. N. N. G. A. I. L., “Two new species of Chusquea subg. Swallenochloa (Poaceae: Bambusoideae: Bambuseae) from Minas Gerais, Brazil, and complete description of C. caparaoensis”, Phytotaxa, vol. 358, no. 3, pp. 235-250, 2018.

B. J. Wilsey, Parent, G., Roulet, N. T., Moore, T. R., and Potvin, C., “Tropical pasture carbon cycling: relationships between C source/sink strength, above‐ground biomass and grazing”, Ecology Letters, vol. 5, no. 3, pp. 367-376, 2002.

S. Brown, Hall, C. A. S., Knabe, W., Raich, J., Trexler, M. C., and Woomer, P., “Tropical forests: their past, present, and potential future role in the terrestrial carbon budget”, Water, Air, and Soil Pollution, vol. 70, no. 1-4, pp. 71-94, 1993.

E. K. Moody, Alda, F., Capps, K. A., Puebla, O., and Turner, B. L., “Trophic Trait Evolution Explains Variation in Nutrient Excretion Stoichiometry among Panamanian Armored Catfishes (Loricariidae)”, Diversity, vol. 11, no. 6, p. 88, 2019.

J. C. Maerz, Myers, E. M., and Adams, D. C., “Trophic polymorphism in a terrestrial salamander”, Evolutionary Ecology Research, vol. 8, no. 1, pp. 23-35, 2006.

D. Debinski, “Trophic Cascades and Biodiversity in Grand Teton National Park”, University of Wyoming National Park Service Research Center Annual Report, vol. 27, no. 1, pp. 28-32, 2003.

E. Sherratt, Alejandrino, A., Kraemer, A. C., Serb, J. M., and Adams, D. C., “Trends in the sand: directional evolution in the shell shape of recessing scallops (Bivalvia: Pectinidae)”, Evolution, 2016.

A. E. Russell, Raich, J. W., Valverde-Barrantes, O. J., and Fisher, R. F., “Tree species effects on soil properties in experimental plantations in tropical moist forest”, Soil Science Society of America Journal, vol. 71, no. 4, pp. 1389-1397, 2007.

S. Radhakrishnan, Literman, R., Neuwald, J., Severin, A., and Valenzuela, N., “Transcriptomic responses to environmental temperature by turtles with temperature-dependent and genotypic sex determination assessed by RNAseq inform the genetic architecture of embryonic gonadal development”, PloS one, vol. 12, no. 3, p. e0172044, 2017.

L. Rutter, Carrillo-Tripp, J., Bonning, B. C., Cook, D., Toth, A. L., and Dolezal, A. G., “Transcriptomic responses to diet quality and viral infection in Apis mellifera”, BMC Genomics, vol. 20, no. 1, p. 412, 2019.

N. G. Davis, Houston, D. D., and Nason, J. D., “Transcriptome-Facilitated Development of SNPs for the Sonoran Desert Rock Fig, Ficus petiolaris (Moraceae)”, Applications in Plant Sciences, vol. 3, no. 7, p. 1500028, 2015.

R. Hovav, Faigenboim-Doron, A., Kadmon, N., Hu, G., Zhang, X., Gallagher, J. P., and Wendel, J. F., “A Transcriptome Profile for Developing Seed of Polyploid Cotton”, The Plant Genome, vol. 8, no. 1, 2015.

, “Tradeoffs and coexistence in fluctuating environments: evidence for a key dispersal-fecundity tradeoff in five nonpollinating fig wasps”, American Naturalist, vol. 186, pp. 151-158, 2015.

B. A Duthie, Abbott, K. C., and Nason, J. D., “Trade-Offs and Coexistence: A Lottery Model Applied to Fig Wasp Communities”, The American Naturalist, vol. 183, no. 6, pp. 826-841, 2014.

B. A Duthie, Abbott, K. C., and Nason, J. D., “Trade-offs and coexistence: a lottery model applied to fig wasp communities”, The American Naturalist, vol. 183, no. 6, pp. 826-841, 2014.

J. A. Rudgers, Strauss, S. Y., and Wendel, J. F., “Trade-offs among anti-herbivore resistance traits: insights from Gossypieae (Malvaceae)”, American Journal of Botany, vol. 91, no. 6, pp. 871-880, 2004.

J. Z Chen, Scheffler, B. E., Dennis, E., Triplett, B. A., Zhang, T., Guo, W., Chen, X., Stelly, D. M., Rabinowicz, P. D., and Town, C. D., “Toward sequencing cotton (Gossypium) genomes”, Plant physiology, vol. 145, no. 4, pp. 1303-1310, 2007.

J. M. Serb, “Toward Developing Models to Study the Disease, Ecology, and Evolution of the Eye in Mollusca*”, American Malacological Bulletin, vol. 26, no. 1/2, pp. 3-18, 2008.

A. H. Paterson, Lan, T. - H., Reischmann, K. P., Chang, C., Lin, Y. - R., Liu, S. - C., Burow, M. D., Kowalski, S. P., Katsar, C. S., and Delmonte, T. A., “Toward a unified genetic map of higher plants, transcending the monocot–dicot divergence”, Nature genetics, vol. 14, no. 4, pp. 380-382, 1996.

G. J. P. Naylor and Adams, D. C., “Total evidence versus relevant evidence: response to O’Leary et al. (2003)”, Systematic Biology, vol. 52, pp. 864-865, 2003.

H. Rogers, Beckman, N. G., Hartig, F., Johnson, J. S., Pufal, G., Shea, K., Zurell, D., Bullock, J. M., Cantrell, R. Stephen, and Loiselle, B., “The total dispersal kernel: a review and future directions”, AoB Plants, 2019.

R. L. Small, Ryburn, J. A., Cronn, R. C., Seelanan, T., and Wendel, J. F., “The tortoise and the hare: choosing between noncoding plastome and nuclear Adh sequences for phylogeny reconstruction in a recently diverged plant group”, American Journal of Botany, vol. 85, no. 9, pp. 1301-1315, 1998.

B. J. Wilsey and Martin, L. M., “Top‐down control of rare species abundances by native ungulates in a grassland restoration”, Restoration Ecology, 2015.

M. Li, An, H., Angelovici, R., Bagaza, C., Batushansky, A., Clark, L., Coneva, V., Donoghue, M., Edwards, E., and Fajardo, D., “Topological data analysis as a morphometric method: using persistent homology to demarcate a leaf morphospace”, Frontiers in Plant Science, vol. 9, p. 553, 2018.

C. E. Grover, Hawkins, J. S., and Wendel, J. F., “Tobacco genomes quickly go up in smoke”, New Phytologist, vol. 175, no. 4, pp. 599-602, 2007.

E. M. Bach and Hofmockel, K. S., “A time for every season: soil aggregate turnover stimulates decomposition and reduces carbon loss in grasslands managed for bioenergy”, GCB Bioenergy, 2015.

J. W. Raich, “Throughfall and stem flow in mature and year-old wet tropical forest.”, Tropical Ecology, vol. 24, no. 2, pp. 234-243, 1983.

D. W. Trapnell, Hamrick, J. L., and Nason, J. D., “Three‐dimensional fine‐scale genetic structure of the neotropical epiphytic orchid, Laelia rubescens”, Molecular Ecology, vol. 13, no. 5, pp. 1111-1118, 2004.

D. I. Green and Crumpton, W. G., “. THREE-DIMENSIONAL SIMULATION OF THE TEMPERATURE AND RESDIENCE TIME DISTRIBUTION DYNAMICS OF A CONSTRUCTED AGRICULTURAL TREATMENT WETLAND”, Environmental factors affecting the residence time distribution dynamics of constructed agricultural wetlands, vol. 1001, p. 140, 2016.

J. A. Sherwood, Debinski, D. M., and Germino, M. J., “Testing the Effects of Simulated Climate Change Effects Using Open Sided Warming Chambers”, University of Wyoming National Park Service Research Center Annual Report, vol. 33, no. 1, pp. 147-153, 2011.

D. M. Debinski, Germino, M., and Demshar, D., “Testing the Effects of Experimental Snow Removal on Soil Moisture and Plant Responses in Montane Meadows”, University of Wyoming National Park Service Research Center Annual Report, vol. 31, no. 1, pp. 81-87, 2008.

A. J. Tanentzap, Kielstra, B. W., Wilkinson, G. M., Berggren, M., Craig, N., del Giorgio, P. A., Grey, J., Gunn, J. M., Jones, S. E., and Karlsson, J., “Terrestrial support of lake food webs: Synthesis reveals controls over cross-ecosystem resource use”, Science Advances, vol. 3, no. 3, p. e1601765, 2017.

K. J. Williams, Wilsey, B. J., McNaughton, S. J., and Banyikwa, F. F., “Temporally variable rainfall does not limit yields of Serengeti grasses”, Oikos, pp. 463-470, 1998.

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