Publications

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2007
S. Arif, Adams, D. C., and Wicknick, J. A., Bioclimatic modelling, morphology, and behaviour reveal alternative mechanisms regulating the distributions of two parapatric salamander species, Evolutionary Ecology Research, vol. 9, no. 5, pp. 843-854, 2007.
D. M. Debinski, Santelmann, M. V., White, D., Lindsay, K. Freemark, Sifneos, J. C., Nassauer, J. I., and Scavia, D., Butterfly Responses, From the Corn Belt to the Gulf: Societal and Environmental Implications of Alternative Agricultural Futures, p. 102, 2007.
J. A. Vogel, Debinski, D. M., Koford, R. R., and Miller, J. R., Butterfly responses to prairie restoration through fire and grazing, Biological Conservation, vol. 140, no. 1, pp. 78-90, 2007.
C. M. Litton, Raich, J. W., and Ryan, M. G., Carbon allocation in forest ecosystems, Global Change Biology, vol. 13, no. 10, pp. 2089-2109, 2007.
G. Mora and Raich, J. W., Carbon‐isotopic composition of soil‐respired carbon dioxide in static closed chambers at equilibrium, Rapid communications in mass spectrometry, vol. 21, no. 12, pp. 1866-1870, 2007.
W. H Polley, Wilsey, B. J., and Derner, J. D., Dominant species constrain effects of species diversity on temporal variability in biomass production of tallgrass prairie, Oikos, vol. 116, no. 12, pp. 2044-2052, 2007.
M. Yoon Chung, Nason, J. D., and Chung, M. Gi, Effects of population succession on demographic and genetic processes: predictions and tests in the daylily Hemerocallis thunbergii (Liliaceae), Molecular ecology, vol. 16, no. 13, pp. 2816-2829, 2007.
D. A. Losure, Wilsey, B. J., and Moloney, K. A., Evenness–invasibility relationships differ between two extinction scenarios in tallgrass prairie, Oikos, vol. 116, no. 1, pp. 87-98, 2007.
P. M. Fortune, Schierenbeck, K. A., Ainouche, A. K., Jacquemin, J., Wendel, J. F., and Ainouche, M. L., Evolutionary dynamics of Waxy and the origin of hexaploid Spartina species (Poaceae), Molecular phylogenetics and evolution, vol. 43, no. 3, pp. 1040-1055, 2007.
O. J. Valverde-Barrantes, Raich, J. W., and Russell, A. E., Fine-root mass, growth and nitrogen content for six tropical tree species, Plant and Soil, vol. 290, no. 1-2, pp. 357-370, 2007.
R. J. Percifield, Hawkins, J. S., McCoy, J. - A., Widrlechner, M. P., and Wendel, J. F., Genetic diversity in Hypericum and AFLP Markers for species-specific identification of H. perforatum L., Planta medica, vol. 73, no. 15, p. 1614, 2007.
J. Rong, F Feltus, A., Waghmare, V. N., Pierce, G. J., Chee, P. W., Draye, X., Saranga, Y., Wright, R. J., Wilkins, T. A., and O May, L., Genetics of complex traits-Meta-analysis of polyploid cotton QTL shows unequal contributions of subgenomes to a complex network of genes and gene clusters implicated in lint fiber development, Genetics, vol. 176, no. 4, pp. 2577-2588, 2007.
M. Santelmann, White, D., Lindsay, K., Nassauer, J., Eilers, J., Vaché, K., Danielson, B., Corry, R., Clark, M., and Polasky, S., An integrated assessment of alternative futures for Corn Belt agriculture, From the Corn Belt to the Gulf: Societal and Environmental Implications of Alternative Agricultural Futures, p. 162, 2007.
J. W. Raich, Russell, A. E., and Bedoya-Arrieta, R., Lignin and enhanced litter turnover in tree plantations of lowland Costa Rica, Forest ecology and management, vol. 239, no. 1, pp. 128-135, 2007.
J. D. Davis, Debinski, D. M., and Danielson, B. J., Local and landscape effects on the butterfly community in fragmented Midwest USA prairie habitats, Landscape Ecology, vol. 22, no. 9, pp. 1341-1354, 2007.
D. C. Adams, West, M. E., and Collyer, M. L., Location‐specific sympatric morphological divergence as a possible response to species interactions in West Virginia Plethodon salamander communities, Journal of Animal Ecology, vol. 76, no. 2, pp. 289-295, 2007.
J. Rong, F Feltus, A., Waghmare, V. N., Pierce, G. J., Chee, P. W., Draye, X., Saranga, Y., Wright, R. J., Wilkins, T. A., and O May, L., Meta-analysis of polyploid cotton QTL shows unequal contributions of subgenomes to a complex network of genes and gene clusters implicated in lint fiber development, Genetics, vol. 176, no. 4, pp. 2577-2588, 2007.
C. E. Grover, Kim, H. R., Wing, R. A., Paterson, A. H., and Wendel, J. F., Microcolinearity and genome evolution in the AdhA region of diploid and polyploid cotton (Gossypium), The Plant Journal, vol. 50, no. 6, pp. 995-1006, 2007.
C. Grover, Kim, H., Wing, R. A., and Wendel, J. F., Microcolinearity in the Allotetraploid Gossypium hirsutum, Genome Exploitation: Data Mining the Genome, p. 231, 2007.
D. C. Adams, Organization of Plethodon salamander communities: guild-based community assembly, Ecology, vol. 88, no. 5, pp. 1292-1299, 2007.
M. L. Collyer, Stockwell, C. A., Adams, D. C., and M Reiser, H., Phenotypic plasticity and contemporary evolution in introduced populations: evidence from translocated populations of white sands pupfish (Cyrpinodon tularosa), Ecological Research, vol. 22, no. 6, pp. 902-910, 2007.
Y. Jin Chun, Collyer, M. L., Moloney, K. A., and Nason, J. D., Phenotypic plasticity of native vs. invasive purple loosestrife: a two-state multivariate approach, Ecology, vol. 88, no. 6, pp. 1499-1512, 2007.
T. Bureau, Hawkins, J. S., Hu, G., Rapp, R. A., Grafenberg, J. L., and Wendel, J. F., Phylogenetic determination of the pace of transposable element proliferation in plants: copia and LINE-like elements in Gossypium, Genome, vol. 51, no. 1, pp. 11-18, 2007.
J. M. Serb and Puslednik, L., Phylogenetic relationships of the pectinidae and the evolution of sexual reproductive modes: How important is dispersal life history?, JOURNAL OF SHELLFISH RESEARCH, vol. 26, no. 4. NATL SHELLFISHERIES ASSOC C/O DR. SANDRA E. SHUMWAY, UNIV CONNECTICUT, 1080 SHENNECOSSETT RD, GROTON, CT 06340 USA, pp. 1344-1345, 2007.
D. C. Adams and Cerney, M. M., Quantifying biomechanical motion using Procrustes motion analysis, Journal of biomechanics, vol. 40, no. 2, pp. 437-444, 2007.
J. S. Hawkins, Rapp, R. A., and Wendel, J. F., Rapid DNA loss as a counterbalance to retrotransposon proliferation in plant genome size evolution, Transposable Elements and Genome Size Dynamics in Gossypium, p. 61, 2007.
M. Yoon Chung and Nason, J. D., Spatial demographic and genetic consequences of harvesting within populations of the terrestrial orchid Cymbidium goeringii, Biological conservation, vol. 137, no. 1, pp. 125-137, 2007.
W. H Polley, Wilsey, B. J., and Tischler, C. R., Species abundances influence the net biodiversity effect in mixtures of two plant species, Basic and applied ecology, vol. 8, no. 3, pp. 209-218, 2007.
B. Wilsey and Stirling, G., Species richness and evenness respond in a different manner to propagule density in developing prairie microcosm communities, Plant Ecology, vol. 190, no. 2, pp. 259-273, 2007.
J. A. Udall, Flagel, L. E., Cheung, F., Woodward, A. W., Hovav, R., Rapp, R. A., Swanson, J. M., Lee, J. J., Gingle, A. R., and Nettleton, D., Spotted cotton oligonucleotide microarrays for gene expression analysis, Bmc Genomics, vol. 8, no. 1, p. 81, 2007.
C. E. Grover, Hawkins, J. S., and Wendel, J. F., Tobacco genomes quickly go up in smoke, New Phytologist, vol. 175, no. 4, pp. 599-602, 2007.
J. Z Chen, Scheffler, B. E., Dennis, E., Triplett, B. A., Zhang, T., Guo, W., Chen, X., Stelly, D. M., Rabinowicz, P. D., and Town, C. D., Toward sequencing cotton (Gossypium) genomes, Plant physiology, vol. 145, no. 4, pp. 1303-1310, 2007.
A. E. Russell, Raich, J. W., Valverde-Barrantes, O. J., and Fisher, R. F., Tree species effects on soil properties in experimental plantations in tropical moist forest, Soil Science Society of America Journal, vol. 71, no. 4, pp. 1389-1397, 2007.
2006
B. J. Wilsey and H Polley, W., Aboveground productivity and root–shoot allocation differ between native and introduced grass species, Oecologia, vol. 150, no. 2, pp. 300-309, 2006.
L. C. Jesse, Moloney, K. A., and Obrycki, J. J., Abundance of arthropods on the branch tips of the invasive plant, Rosa multiflora (Rosaceae), Weed biology and management, vol. 6, no. 4, pp. 204-211, 2006.
C. V Von Mark, Nason, J. D., Luhman, R., Marek, L. F., Shoemaker, R. C., E Brummer, C., and Gardner, C. A. C., Analysis of bulked and redundant accessions of Brassica germplasm using assignment tests of microsatellite markers, Euphytica, vol. 152, no. 3, pp. 339-349, 2006.
L. M. Martin and Wilsey, B. J., Assessing grassland restoration success: relative roles of seed additions and native ungulate activities, Journal of Applied Ecology, vol. 43, no. 6, pp. 1098-1109, 2006.
N. M. Davros, Debinski, D. M., Reeder, K. F., and Hohman, W. L., Butterflies and continuous conservation reserve program filter strips: landscape considerations, Wildlife Society Bulletin, vol. 34, no. 4, pp. 936-943, 2006.
J. O. Stireman, Nason, J. D., Heard, S. B., and Seehawer, J. M., Cascading host-associated genetic differentiation in parasitoids of phytophagous insects, Proceedings of the Royal Society of London B: Biological Sciences, vol. 273, no. 1586, pp. 523-530, 2006.
I. Álvarez and Wendel, J. F., Cryptic interspecific introgression and genetic differentiation within Gossypium aridum (Malvaceae) and its relatives, Evolution, vol. 60, no. 3, pp. 505-517, 2006.
J. S. Hawkins, Kim, H. R., Nason, J. D., Wing, R. A., and Wendel, J. F., Differential lineage-specific amplification of transposable elements is responsible for genome size variation in Gossypium, Genome research, vol. 16, no. 10, pp. 1252-1261, 2006.
J. M. Serb, Discovery of genetically distinct sympatric lineages in the freshwater mussel Cyprogenia aberti (Bivalvia: Unionidae), Journal of Molluscan Studies, vol. 72, no. 4, pp. 425-434, 2006.
S. B. Heard, III, J. O. Stireman, Nason, J. D., Cox, G. H., Kolacz, C. R., and Brown, J. M., On the elusiveness of enemy-free space: spatial, temporal, and host-plant-related variation in parasitoid attack rates on three gallmakers of goldenrods, Oecologia, vol. 150, no. 3, pp. 421-434, 2006.
J. Hollander, Adams, D. C., and Johannesson, K., Evolution of adaptation through allometric shifts in a marine snail, Evolution, vol. 60, no. 12, pp. 2490-2497, 2006.
S. G. Hegde, Nason, J. D., Clegg, J. M., and Ellstrand, N. C., The evolution of California's wild radish has resulted in the extinction of its progenitors, Evolution, vol. 60, no. 6, pp. 1187-1197, 2006.
D. M. Debinski, Forest fragmentation and matrix effects: the matrix does matter, Journal of Biogeography, vol. 33, no. 10, pp. 1791-1792, 2006.
J. A. Udall, Swanson, J. M., Haller, K., Rapp, R. A., Sparks, M. E., Hatfield, J., Yu, Y., Wu, Y., Dowd, C., and Arpat, A. B., A global assembly of cotton ESTs, Genome research, vol. 16, no. 3, pp. 441-450, 2006.
A. L. Keyte, Percifield, R., Liu, B., and Wendel, J. F., Infraspecific DNA methylation polymorphism in cotton (Gossypium hirsutum L.), Journal of Heredity, vol. 97, no. 5, pp. 444-450, 2006.
L. C. Jesse, Moloney, K. A., and Obrycki, J. J., Insect pollinators of the invasive plant, Rosa multiflora (Rosaceae), in Iowa, USA, Weed Biology and Management, vol. 6, no. 4, pp. 235-240, 2006.
J. A. Pritchard, Debinski, D. M., Olechnowski, B., and Vannimwegen, R., The landscape of paul Errington's work, Wildlife Society Bulletin, vol. 34, no. 5, pp. 1411-1416, 2006.

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