Publications

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2008
C. Grover, Hawkins, J., and Wendel, J. F., Phylogenetic insights into the pace and pattern of plant genome size evolution, 2008.
D. C. Adams, Phylogenetic meta‐analysis, Evolution, vol. 62, no. 3, pp. 567-572, 2008.
L. E. Flagel, Rapp, R. A., Grover, C. E., Widrlechner, M. P., Hawkins, J., Grafenberg, J. L., Álvarez, I., Chung, G. Young, and Wendel, J. F., Phylogenetic, morphological, and chemotaxonomic incongruence in the North American endemic genus Echinacea, American journal of botany, vol. 95, no. 6, pp. 756-765, 2008.
J. S. Hawkins, Grover, C. E., and Wendel, J. F., Repeated big bangs and the expanding universe: Directionality in plant genome size evolution, Plant Science, vol. 174, no. 6, pp. 557-562, 2008.
J. M. Calabrese, Ries, L., Matter, S. F., Debinski, D. M., Auckland, J. N., Roland, J., and Fagan, W. F., Reproductive asynchrony in natural butterfly populations and its consequences for female matelessness, Journal of Animal Ecology, vol. 77, no. 4, pp. 746-756, 2008.
B. F. M. Olechnowski and Debinski, D. M., Response of songbirds to riparian willow habitat structure in the Greater Yellowstone Ecosystem, The Wilson Journal of Ornithology, vol. 120, no. 4, pp. 830-839, 2008.
R. C. Garrick, Meadows, C. A., Nicolas, A. N., Nason, J. D., and Dyer, R. J., A set of polymorphic nuclear intron markers for conservation genetics and phylogeography of Euphorbia species (Pedilanthus clade), Conservation Genetics, vol. 9, no. 6, pp. 1673-1676, 2008.
K. A. Moloney and Jeltsch, F., Space matters–Novel developments in plant ecology through spatial modelling, Perspectives in Plant Ecology, Evolution and Systematics, vol. 9, no. 3, pp. 119-120, 2008.
F. Jeltsch, Moloney, K. A., Schurr, F. M., Köchy, M., and Schwager, M., The state of plant population modelling in light of environmental change, Perspectives in Plant Ecology, Evolution and Systematics, vol. 9, no. 3, pp. 171-189, 2008.
D. M. Debinski, Germino, M., and Demshar, D., Testing the Effects of Experimental Snow Removal on Soil Moisture and Plant Responses in Montane Meadows, University of Wyoming National Park Service Research Center Annual Report, vol. 31, no. 1, pp. 81-87, 2008.
J. M. Serb, Toward Developing Models to Study the Disease, Ecology, and Evolution of the Eye in Mollusca*, American Malacological Bulletin, vol. 26, no. 1/2, pp. 3-18, 2008.
M. Condon, Adams, D. C., Bann, D., Flaherty, K., Gammons, J., Johnson, J., Lewis, M. L., Marsteller, S., Scheffer, S. J., and Serna, F., Uncovering tropical diversity: six sympatric cryptic species of Blepharoneura (Diptera: Tephritidae) in flowers of Gurania spinulosa (Cucurbitaceae) in eastern Ecuador, Biological Journal of the Linnean Society, vol. 93, no. 4, pp. 779-797, 2008.
2007
D. C. Adams and Collyer, M. L., Analysis of character divergence along environmental gradients and other covariates, Evolution, vol. 61, no. 3, pp. 510-515, 2007.
M. L. Collyer and Adams, D. C., Analysis of two-state multivariate phenotypic change in ecological studies, Ecology, vol. 88, no. 3, pp. 683-692, 2007.
S. Arif, Adams, D. C., and Wicknick, J. A., Bioclimatic modelling, morphology, and behaviour reveal alternative mechanisms regulating the distributions of two parapatric salamander species, Evolutionary Ecology Research, vol. 9, no. 5, pp. 843-854, 2007.
D. M. Debinski, Santelmann, M. V., White, D., Lindsay, K. Freemark, Sifneos, J. C., Nassauer, J. I., and Scavia, D., Butterfly Responses, From the Corn Belt to the Gulf: Societal and Environmental Implications of Alternative Agricultural Futures, p. 102, 2007.
J. A. Vogel, Debinski, D. M., Koford, R. R., and Miller, J. R., Butterfly responses to prairie restoration through fire and grazing, Biological Conservation, vol. 140, no. 1, pp. 78-90, 2007.
C. M. Litton, Raich, J. W., and Ryan, M. G., Carbon allocation in forest ecosystems, Global Change Biology, vol. 13, no. 10, pp. 2089-2109, 2007.
G. Mora and Raich, J. W., Carbon‐isotopic composition of soil‐respired carbon dioxide in static closed chambers at equilibrium, Rapid communications in mass spectrometry, vol. 21, no. 12, pp. 1866-1870, 2007.
W. H Polley, Wilsey, B. J., and Derner, J. D., Dominant species constrain effects of species diversity on temporal variability in biomass production of tallgrass prairie, Oikos, vol. 116, no. 12, pp. 2044-2052, 2007.
M. Yoon Chung, Nason, J. D., and Chung, M. Gi, Effects of population succession on demographic and genetic processes: predictions and tests in the daylily Hemerocallis thunbergii (Liliaceae), Molecular ecology, vol. 16, no. 13, pp. 2816-2829, 2007.
D. A. Losure, Wilsey, B. J., and Moloney, K. A., Evenness–invasibility relationships differ between two extinction scenarios in tallgrass prairie, Oikos, vol. 116, no. 1, pp. 87-98, 2007.
P. M. Fortune, Schierenbeck, K. A., Ainouche, A. K., Jacquemin, J., Wendel, J. F., and Ainouche, M. L., Evolutionary dynamics of Waxy and the origin of hexaploid Spartina species (Poaceae), Molecular phylogenetics and evolution, vol. 43, no. 3, pp. 1040-1055, 2007.
O. J. Valverde-Barrantes, Raich, J. W., and Russell, A. E., Fine-root mass, growth and nitrogen content for six tropical tree species, Plant and Soil, vol. 290, no. 1-2, pp. 357-370, 2007.
R. J. Percifield, Hawkins, J. S., McCoy, J. - A., Widrlechner, M. P., and Wendel, J. F., Genetic diversity in Hypericum and AFLP Markers for species-specific identification of H. perforatum L., Planta medica, vol. 73, no. 15, p. 1614, 2007.
J. Rong, F Feltus, A., Waghmare, V. N., Pierce, G. J., Chee, P. W., Draye, X., Saranga, Y., Wright, R. J., Wilkins, T. A., and O May, L., Genetics of complex traits-Meta-analysis of polyploid cotton QTL shows unequal contributions of subgenomes to a complex network of genes and gene clusters implicated in lint fiber development, Genetics, vol. 176, no. 4, pp. 2577-2588, 2007.
M. Santelmann, White, D., Lindsay, K., Nassauer, J., Eilers, J., Vaché, K., Danielson, B., Corry, R., Clark, M., and Polasky, S., An integrated assessment of alternative futures for Corn Belt agriculture, From the Corn Belt to the Gulf: Societal and Environmental Implications of Alternative Agricultural Futures, p. 162, 2007.
J. W. Raich, Russell, A. E., and Bedoya-Arrieta, R., Lignin and enhanced litter turnover in tree plantations of lowland Costa Rica, Forest ecology and management, vol. 239, no. 1, pp. 128-135, 2007.
J. D. Davis, Debinski, D. M., and Danielson, B. J., Local and landscape effects on the butterfly community in fragmented Midwest USA prairie habitats, Landscape Ecology, vol. 22, no. 9, pp. 1341-1354, 2007.
D. C. Adams, West, M. E., and Collyer, M. L., Location‐specific sympatric morphological divergence as a possible response to species interactions in West Virginia Plethodon salamander communities, Journal of Animal Ecology, vol. 76, no. 2, pp. 289-295, 2007.
J. Rong, F Feltus, A., Waghmare, V. N., Pierce, G. J., Chee, P. W., Draye, X., Saranga, Y., Wright, R. J., Wilkins, T. A., and O May, L., Meta-analysis of polyploid cotton QTL shows unequal contributions of subgenomes to a complex network of genes and gene clusters implicated in lint fiber development, Genetics, vol. 176, no. 4, pp. 2577-2588, 2007.
C. E. Grover, Kim, H. R., Wing, R. A., Paterson, A. H., and Wendel, J. F., Microcolinearity and genome evolution in the AdhA region of diploid and polyploid cotton (Gossypium), The Plant Journal, vol. 50, no. 6, pp. 995-1006, 2007.
C. Grover, Kim, H., Wing, R. A., and Wendel, J. F., Microcolinearity in the Allotetraploid Gossypium hirsutum, Genome Exploitation: Data Mining the Genome, p. 231, 2007.
D. C. Adams, Organization of Plethodon salamander communities: guild-based community assembly, Ecology, vol. 88, no. 5, pp. 1292-1299, 2007.
M. L. Collyer, Stockwell, C. A., Adams, D. C., and M Reiser, H., Phenotypic plasticity and contemporary evolution in introduced populations: evidence from translocated populations of white sands pupfish (Cyrpinodon tularosa), Ecological Research, vol. 22, no. 6, pp. 902-910, 2007.
Y. Jin Chun, Collyer, M. L., Moloney, K. A., and Nason, J. D., Phenotypic plasticity of native vs. invasive purple loosestrife: a two-state multivariate approach, Ecology, vol. 88, no. 6, pp. 1499-1512, 2007.
T. Bureau, Hawkins, J. S., Hu, G., Rapp, R. A., Grafenberg, J. L., and Wendel, J. F., Phylogenetic determination of the pace of transposable element proliferation in plants: copia and LINE-like elements in Gossypium, Genome, vol. 51, no. 1, pp. 11-18, 2007.
J. M. Serb and Puslednik, L., Phylogenetic relationships of the pectinidae and the evolution of sexual reproductive modes: How important is dispersal life history?, JOURNAL OF SHELLFISH RESEARCH, vol. 26, no. 4. NATL SHELLFISHERIES ASSOC C/O DR. SANDRA E. SHUMWAY, UNIV CONNECTICUT, 1080 SHENNECOSSETT RD, GROTON, CT 06340 USA, pp. 1344-1345, 2007.
D. C. Adams and Cerney, M. M., Quantifying biomechanical motion using Procrustes motion analysis, Journal of biomechanics, vol. 40, no. 2, pp. 437-444, 2007.
J. S. Hawkins, Rapp, R. A., and Wendel, J. F., Rapid DNA loss as a counterbalance to retrotransposon proliferation in plant genome size evolution, Transposable Elements and Genome Size Dynamics in Gossypium, p. 61, 2007.
M. Yoon Chung and Nason, J. D., Spatial demographic and genetic consequences of harvesting within populations of the terrestrial orchid Cymbidium goeringii, Biological conservation, vol. 137, no. 1, pp. 125-137, 2007.
W. H Polley, Wilsey, B. J., and Tischler, C. R., Species abundances influence the net biodiversity effect in mixtures of two plant species, Basic and applied ecology, vol. 8, no. 3, pp. 209-218, 2007.
B. Wilsey and Stirling, G., Species richness and evenness respond in a different manner to propagule density in developing prairie microcosm communities, Plant Ecology, vol. 190, no. 2, pp. 259-273, 2007.
J. A. Udall, Flagel, L. E., Cheung, F., Woodward, A. W., Hovav, R., Rapp, R. A., Swanson, J. M., Lee, J. J., Gingle, A. R., and Nettleton, D., Spotted cotton oligonucleotide microarrays for gene expression analysis, Bmc Genomics, vol. 8, no. 1, p. 81, 2007.
C. E. Grover, Hawkins, J. S., and Wendel, J. F., Tobacco genomes quickly go up in smoke, New Phytologist, vol. 175, no. 4, pp. 599-602, 2007.
J. Z Chen, Scheffler, B. E., Dennis, E., Triplett, B. A., Zhang, T., Guo, W., Chen, X., Stelly, D. M., Rabinowicz, P. D., and Town, C. D., Toward sequencing cotton (Gossypium) genomes, Plant physiology, vol. 145, no. 4, pp. 1303-1310, 2007.
A. E. Russell, Raich, J. W., Valverde-Barrantes, O. J., and Fisher, R. F., Tree species effects on soil properties in experimental plantations in tropical moist forest, Soil Science Society of America Journal, vol. 71, no. 4, pp. 1389-1397, 2007.

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