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J. W. Raich, Russell, A. E., and Bedoya-Arrieta, R., Lignin and enhanced litter turnover in tree plantations of lowland Costa Rica, Forest ecology and management, vol. 239, no. 1, pp. 128-135, 2007.
J. W. Raich, Bowden, R. D., and Steudler, P. A., Comparison of two static chamber techniques for determining carbon dioxide efflux from forest soils, Soil Science Society of America Journal, vol. 54, no. 6, pp. 1754-1757, 1990.
J. W. Raich and Turner, I. M., A preliminary list of the tree, shrub, palm and pandan species of the Pantai Acheh Forest Reserve, Penang, Malayan Nat, vol. 43, no. 3, pp. 23-28, 1990.
J. W. Raich, Rastetter, E. B., Melillo, J. M., Kicklighter, D. W., Steudler, P. A., Peterson, B. J., Grace, A. L., Moore, III, B., and Vorosmarty, C. J., Potential net primary productivity in South America: Application of a global model, Ecol. Appl, vol. 1, pp. 399-429, 1991.
J. W. Raich, Seasonal and spatial variation in the light environment in a tropical dipterocarp forest and gaps, Biotropica, pp. 299-302, 1989.
J. W. Raich and Mora, G., Estimating root plus rhizosphere contributions to soil respiration in annual croplands, Soil Science Society of America Journal, vol. 69, no. 3, pp. 634-639, 2005.
J. W. Raich, Aboveground productivity and soil respiration in three Hawaiian rain forests, Forest Ecology and Management, vol. 107, no. 1, pp. 309-318, 1998.
J. W. Raich and Potter, C. S., Global patterns of carbon dioxide emission from soils, Global Biogeochemical Cycles, vol. 9, no. 1, pp. 23-36, 1995.
J. W. Raich, Parton, W. J., Russell, A. E., Jr, R. L. Sanford, and Vitousek, P. M., Analysis of factors regulating ecosystem development on Mauna Loa using the Century model, Biogeochemistry, vol. 51, no. 2, pp. 161-191, 2000.
R. A. Rapp, Udall, J. A., and Wendel, J. F., Genomic expression dominance in allopolyploids, Bmc Biology, vol. 7, no. 1, p. 18, 2009.
R. A. Rapp and Wendel, J. F., Epigenetics and plant evolution, New Phytologist, vol. 168, no. 1, pp. 81-91, 2005.
R. A. Rapp, Haigler, C. H., Flagel, L., Hovav, R. H., Udall, J. A., and Wendel, J. F., Gene expression in developing fibres of Upland cotton (Gossypium hirsutum L.) was massively altered by domestication, BMC biology, vol. 8, no. 1, p. 139, 2010.
R. A. Rapp, Álvarez, I., and Wendel, J. F., Molecular confirmation of the position of Gossypium trifurcatum Vollesen, Genetic Resources and Crop Evolution, vol. 52, no. 6, pp. 749-753, 2005.
R. A. Rapp, Álvarez, I., and Wendel, J. F., Molecular confirmation of the position of Gossypium trifurcatum Vollesen, Genetic Resources and Crop Evolution, vol. 52, no. 6, pp. 749-753, 2005.
D. M. Reding, Addis, E. A., Palacios, M. G., Schwartz, T. S., and Bronikowski, A. M., Insulin-like signaling (IIS) responses to temperature, genetic background, and growth variation in garter snakes with divergent life histories, General and Comparative Endocrinology, 2016.
K. F. Reeder, Debinski, D. M., and Danielson, B. J., Factors affecting butterfly use of filter strips in Midwestern USA, Agriculture, ecosystems & environment, vol. 109, no. 1, pp. 40-47, 2005.
J. M. Refsnider, Reedy, A. M., Warner, D. A., and Janzen, F. J., Do trade‐offs between predation pressures on females versus nests drive nest‐site choice in painted turtles?, Biological Journal of the Linnean Society, 2015.
J. M. Refsnider and Janzen, F. J., Temperature-Dependent Sex Determination under Rapid Anthropogenic Environmental Change: Evolution at a Turtle’s Pace?, Journal of Heredity, p. esv053, 2015.
S. M. Rehan, Glastad, K. M., Steffen, M. A., Fay, C. R., Hunt, B. G., and Toth, A. L., Conserved genes underlie phenotypic plasticity in an incipiently social bee, Genome Biology and Evolution, 2018.
E. M. Rehm, Chojnacki, J., Rogers, H. S., and Savidge, J. A., Differences among avian frugivores in seed dispersal to degraded habitats, Restoration Ecology, 2017.
E. Rehm, Fricke, E., Bender, J., Savidge, J., and Rogers, H., Animal movement drives variation in seed dispersal distance in a plant–animal network, Proceedings of the Royal Society B, vol. 286, no. 1894, p. 20182007, 2019.
A. J. Reinisch, Dong, J. - M., Brubaker, C. L., Stelly, D. M., Wendel, J. F., and Paterson, A. H., A detailed RFLP map of cotton, Gossypium hirsutum x Gossypium barbadense: chromosome organization and evolution in a disomic polyploid genome., Genetics, vol. 138, no. 3, pp. 829-847, 1994.
S. Renny-Byfield and Wendel, J. F., Doubling down on genomes: polyploidy and crop plants, American journal of botany, vol. 101, no. 10, pp. 1711-1725, 2014.
S. Renny-Byfield, Gong, L., Gallagher, J. P., and Wendel, J. F., Persistence of Subgenomes in Paleopolyploid Cotton after 60 My of Evolution, Molecular biology and evolution, vol. 32, no. 4, pp. 1063-1071, 2015.
S. Renny-Byfield, Page, J. T., Udall, J. A., Sanders, W. S., Peterson, D. G., Arick, M. A., Grover, C. E., and Wendel, J. F., Independent domestication of two old world cotton species, Genome biology and evolution, vol. 8, no. 6, pp. 1940-1947, 2016.
S. Renny-Byfield, Gallagher, J. P., Grover, C. E., Szadkowski, E., Page, J. T., Udall, J. A., Wang, X., Paterson, A. H., and Wendel, J. F., Ancient gene duplicates in Gossypium (Cotton) exhibit near-complete expression divergence, Genome biology and evolution, vol. 6, no. 3, pp. 559-571, 2014.
J. W. Rice, Clough, M. P., Olson, J. K., Adams, D. C., and Colbert, J. T., University faculty and their knowledge & acceptance of biological evolution, Evolution: Education and Outreach, vol. 8, no. 1, p. 8, 2015.
C. L. Richards and Wendel, J. F., The hairy problem of epigenetics in evolution, New Phytologist, vol. 191, no. 1, pp. 7-9, 2011.
L. Ries, Debinski, D. M., and Wieland, M. L., Conservation value of roadside prairie restoration to butterfly communities, Conservation Biology, vol. 15, no. 2, pp. 401-411, 2001.
L. Ries and Debinski, D. M., Butterfly responses to habitat edges in the highly fragmented prairies of Central Iowa, Journal of Animal Ecology, vol. 70, no. 5, pp. 840-852, 2001.
L. H. Rieseberg and Wendel, J. F., Introgression and its consequences in plants, Hybrid zones and the evolutionary process, pp. 70-109, 1993.
L. H. Rieseberg and Wendel, J. F., Plant speciation–rise of the poor cousins, New Phytologist, vol. 161, no. 1, pp. 3-8, 2004.
A. S. Rivera, M Pankey, S., Plachetzki, D. C., Villacorta, C., Syme, A. E., Serb, J. M., Omilian, A. R., and Oakley, T. H., Gene duplication and the origins of morphological complexity in pancrustacean eyes, a genomic approach, BMC evolutionary biology, vol. 10, no. 1, p. 123, 2010.
G. Rivera, Davis, J. N., Godwin, J. C., and Adams, D. C., Repeatability of Habitat-Associated Divergence in Shell Shape of Turtles, Evolutionary Biology, vol. 41, pp. 29-37, 2014.
W. A. Robinson and Debinski, D. M., Epigaeic Ant Communities Along a Soil Moisture Gradient in Grand Teton Montane Meadows, University of Wyoming National Park Service Research Center Annual Report, vol. 31, no. 1, pp. 135-140, 2008.
H. S. Rogers, Buhle, E. R., HilleRisLambers, J., Fricke, E. C., Miller, R. H., and Tewksbury, J. J., Effects of an invasive predator cascade to plants via mutualism disruption, Nature Communications, vol. 8, p. 14557, 2017.
H. S. Rogers and Fricke, E. C., Maternal microbes complicate coexistence for tropical trees, Proceedings of the National Academy of Sciences, p. 201902736, 2019.
J. Rong, Abbey, C., Bowers, J. E., Brubaker, C. L., Chang, C., Chee, P. W., Delmonte, T. A., Ding, X., Garza, J. J., and Marler, B. S., A 3347-locus genetic recombination map of sequence-tagged sites reveals features of genome organization, transmission and evolution of cotton (Gossypium), Genetics, vol. 166, no. 1, pp. 389-417, 2004.
J. Rong, F Feltus, A., Waghmare, V. N., Pierce, G. J., Chee, P. W., Draye, X., Saranga, Y., Wright, R. J., Wilkins, T. A., and O May, L., Meta-analysis of polyploid cotton QTL shows unequal contributions of subgenomes to a complex network of genes and gene clusters implicated in lint fiber development, Genetics, vol. 176, no. 4, pp. 2577-2588, 2007.
J. Rong, F Feltus, A., Waghmare, V. N., Pierce, G. J., Chee, P. W., Draye, X., Saranga, Y., Wright, R. J., Wilkins, T. A., and O May, L., Genetics of complex traits-Meta-analysis of polyploid cotton QTL shows unequal contributions of subgenomes to a complex network of genes and gene clusters implicated in lint fiber development, Genetics, vol. 176, no. 4, pp. 2577-2588, 2007.
J. Rong, Pierce, G. J., Waghmare, V. N., Rogers, C. J., Desai, A., Chee, P. W., O May, L., Gannaway, J. R., Wendel, J. F., and Wilkins, T. A., Genetic mapping and comparative analysis of seven mutants related to seed fiber development in cotton, Theoretical and applied genetics, vol. 111, no. 6, pp. 1137-1146, 2005.
M. S. Rosenberg, Adams, D. C., and Gurevitch, J., Metawin: Statistical software for meta-analysis with resampling tests., 1997.
M. S. Rosenberg, Adams, D. C., and Gurevitch, J., MetaWin: statistical software for meta-analysis. Sinauer Associates Sunderland, Massachusetts, USA, 2000.
H. Rousseau, Rousseau-Gueutin, M., Dauvergne, X., Boutte, J., Simon, G., Marnet, N., Bouchereau, A., Guiheneuf, S., Bazureau, J. - P., and Morice, J., Evolution of DMSP (dimethylsulfoniopropionate) biosynthesis pathway: Origin and phylogenetic distribution in polyploid Spartina (Poaceae, Chloridoideae), Molecular Phylogenetics and Evolution, 2017.
L. Rüber and Adams, D. C., Evolutionary convergence of body shape and trophic morphology in cichlids from Lake Tanganyika, Journal of Evolutionary Biology, vol. 14, no. 2, pp. 325-332, 2001.
J. A. Rudgers, Strauss, S. Y., and Wendel, J. F., Trade-offs among anti-herbivore resistance traits: insights from Gossypieae (Malvaceae), American Journal of Botany, vol. 91, no. 6, pp. 871-880, 2004.
E. Ruiz-Sanchez, Mejía-Saulés, T., Cortés, G., and Clark, L. G., Chusquea gibcooperi (Poaceae: Bambusoideae: Bambuseae: Chusqueinae), a new species endemic to Mexico, Brittonia, pp. 1-6, 2015.
E. Ruiz-Sanchez, Clark, L. G., Londoño, X., Mejía-Saulés, T., and Cortés, G., Morphological keys to the genera and species of bamboos (Poaceae: Bambusoideae) of Mexico, Phytotaxa, vol. 236, no. 1, pp. 1-24, 2015.
E. Ruiz-Sanchez, Clark, L. G., Mejía-Saulés, T., and LOREA-HERNÁNDEZ, F. R. A. N. C. I. S. C. O., A new species of Merostachys (Poaceae: Bambusoideae: Bambuseae: Arthrostylidiinae) with the northernmost distribution of the genus, Phytotaxa, vol. 344, no. 1, pp. 31-38, 2018.
E. Ruiz‐Sanchez, Castro‐Castro, A., and Clark, L. G., Chusquea septentrionalis sp. nov.(Poaceae: Bambusoideae) from the Madrean region in Durango, Mexico, Nordic Journal of Botany, 2017.

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