Publications

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Journal Article
J. F. Wendel, The wondrous cycles of polyploidy in plants., American journal of botany, 2015.
Y. Bao, Hu, G., Grover, C. E., Conover, J., Yuan, D., and Wendel, J. F., Unraveling cis and trans regulatory evolution during cotton domestication, Nature Communications, vol. 10, no. 1, pp. 1-12, 2019.
N. Karimi, Grover, C. E., Gallagher, J. P., Wendel, J. F., Ané, C., and Baum, D. A., Reticulate evolution helps explain apparent homoplasy in floral biology and pollination in baobabs (Adansonia; Bombacoideae; Malvaceae), Systematic biology, 2019.
J. Han, Masonbrink, R. E., Shan, W., Song, F., Zhang, J., Yu, W., Wang, K., Wu, Y., Tang, H., and Wendel, J. F., Rapid proliferationand nucleolar organizer targeting centromeric retrotransposonsin cotton, The Plant Journal, 2016.
M. Tang, Chen, Z., Grover, C. E., Wang, Y., Li, S., Liu, G., Ma, Z., Wendel, J. F., and Hua, J., Rapid evolutionary divergence of Gossypium barbadense and G. hirsutum mitochondrial genomes, BMC Genomics, vol. 16, no. 1, p. 770, 2015.
R. A. Rapp, Álvarez, I., and Wendel, J. F., Molecular confirmation of the position of Gossypium trifurcatum Vollesen, Genetic Resources and Crop Evolution, vol. 52, no. 6, pp. 749-753, 2005.
J. L. Conover, Karimi, N., Stenz, N., Ané, C., Grover, C. E., Skema, C., Tate, J. A., Wolff, K., Logan, S. A., and Wendel, J. F., A Malvaceae mystery: A mallow maelstrom of genome multiplications and maybe misleading methods?, Journal of Integrative Plant Biology, 2018.
J. F. Wendel, Lisch, D., Hu, G., and Mason, A. S., The long and short of doubling down: polyploidy, epigenetics, and the temporal dynamics of genome fractionation, Current Opinion in Genetics & Development, vol. 49, pp. 1-7, 2018.
S. Renny-Byfield, Page, J. T., Udall, J. A., Sanders, W. S., Peterson, D. G., Arick, M. A., Grover, C. E., and Wendel, J. F., Independent domestication of two old world cotton species, Genome biology and evolution, vol. 8, no. 6, pp. 1940-1947, 2016.
G. Nieto Feliner, Casacuberta, J., and Wendel, J. F., Genomics of evolutionary novelty in hybrids and polyploids, Frontiers in Genetics, vol. 11, 2020.
J. - F. Cao, Huang, J. - Q., Liu, X., Huang, C. - C., Zheng, Z. - S., Zhang, X. - F., Shangguan, X. - X., Wang, L. - J., Zhang, Y. - G., and Wendel, J. F., Genome-wide characterization of the GRF family and their roles in response to salt stress in Gossypium, BMC genomics, vol. 21, no. 1, pp. 1-16, 2020.
G. Hu, Hovav, R., Grover, C. E., Faigenboim-Doron, A., Kadmon, N., Page, J. T., Udall, J. A., and Wendel, J. F., Evolutionary Conservation and Divergence of Gene Coexpression Networks in Gossypium (Cotton) Seeds, Genome Biology and Evolution, p. evw280, 2017.
Z. Chen, Nie, H., Grover, C. E., Wang, Y., Li, P., Wang, M., Pei, H., Zhao, Y., Li, S., and Wendel, J. F., Entire nucleotide sequences of Gossypium raimondii and G. arboreum mitochondrial genomes revealed A‐genome species as cytoplasmic donor of the allotetraploid species, Plant Biology, 2016.
W. A. N. G. Kunbo, Wendel, J. F., and Jinping, H. U. A., Designations for individual genomes and chromosomes in Gossypium, Journal of Cotton Research, vol. 1, no. 1, p. 3, 2018.
C. Li, Sun, X., Conover, J. L., Zhang, Z., Wang, J., Wang, X., Deng, X., Wang, H., Liu, B., and Wendel, J. F., Cytonuclear coevolution following homoploid hybrid speciation in Aegilops tauschii, Molecular Biology and Evolution, 2018.
J. P. Gallagher, Grover, C. E., Hu, G., Jareczek, J. J., and Wendel, J. F., Conservation and Divergence in Duplicated Fiber Coexpression Networks Accompanying Domestication of the Polyploid Gossypium hirsutum L., G3: Genes, Genomes, Genetics, 2020.
Z. Chen, Zhao, J., Qiao, J., Li, W., Li, J., Xu, R., Wang, H., Liu, Z., Xing, B., and Wendel, J. F., Comparative analysis of codon usage between Gossypium hirsutum and G. barbadense mitochondrial genomes, Mitochondrial DNA Part B, vol. 5, no. 3, pp. 2500-2506, 2020.