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R. Cronn, Small, R. L., Haselkorn, T., and Wendel, J. F., Cryptic repeated genomic recombination during speciation in Gossypium gossypioides, Evolution, vol. 57, no. 11, pp. 2475-2489, 2003.
I. Álvarez and Wendel, J. F., Cryptic interspecific introgression and genetic differentiation within Gossypium aridum (Malvaceae) and its relatives, Evolution, vol. 60, no. 3, pp. 505-517, 2006.
D. M. Debinski, Moranz, R. A., Delaney, J. T., Miller, J. R., Engle, D. M., Winkler, L. B., McGranahan, D. A., Barney, R. J., Trager, J. C., and Stephenson, A. L., A cross-taxonomic comparison of insect responses to grassland management and land-use legacies, Ecosphere, vol. 2, no. 12, p. art131, 2011.
V. D. Picasso, E Brummer, C., Liebman, M., Dixon, P. M., and Wilsey, B. J., Crop species diversity affects productivity and weed suppression in perennial polycultures under two management strategies, Crop Science, vol. 48, no. 1, pp. 331-342, 2008.
K. M. Olsen and Wendel, J. F., Crop plants as models for understanding plant adaptation and diversification, Frontiers in plant science, vol. 4, 2013.
G. M. Janzen and Hufford, M. B., Crop Domestication: A Sneak-Peek into the Midpoint of Maize Evolution, Current Biology, vol. 26, no. 23, pp. R1240-R1242, 2016.
M. B. Hufford, Mier y Teran, J. C. Berny, and Gepts, P., Crop Biodiversity: An Unfinished Magnum Opus of Nature, Annual Review of Plant Biology, vol. 70, pp. 727-751, 2019.
S. Hyberg, Iovanna, R., Crumpton, W., and Richmond, S., The cost effectiveness of wetlands designed and sited for nitrate removal: The effect of increased efficiency, rising easement costs, and lower interest rates, Journal of Soil and Water Conservation, vol. 70, no. 2, 2015.
D. Allen McGranahan, Engle, D. M., Harr, R. N., Miller, J. R., and Debinski, D. M., COS 73-5: The ecological oddity of an invasive Eurasian grass that lengthens fire-return interval, The 93rd ESA Annual Meeting, 2008.
R. L. Small and Wendel, J. F., Copy number lability and evolutionary dynamics of the Adh gene family in diploid and tetraploid cotton (Gossypium), Genetics, vol. 155, no. 4, pp. 1913-1926, 2000.
P. L. VanderWiel, Voytas, D. F., and Wendel, J. F., Copia-like retrotransposable element evolution in diploid and polyploid cotton (Gossypium L.), Journal of molecular evolution, vol. 36, no. 5, pp. 429-447, 1993.
L. E. Flagel, Chen, L., Chaudhary, B., and Wendel, J. F., Coordinated and fine-scale control of homoeologous gene expression in allotetraploid cotton, Journal of heredity, p. esp003, 2009.
A. Alejandrino, Puslednik, L., and Serb, J. M., Convergent and parallel evolution in life habit of the scallops (Bivalvia: Pectinidae), BMC Evolutionary Biology, vol. 11, no. 1, p. 164, 2011.
L. G. Clark, Londoño, X., Tyrrell, C. D., and Judziewicz, E. J., Convergence strikes again in the Neotropical woody bamboos (Poaceae: Bambusoideae: Bambuseae): a new Andean genus and a new species, Botanical Journal of the Linnean Society, 2019.
C. - M. Shan, Shangguan, X. - X., Zhao, B., Zhang, X. - F., Chao, L. -men, Yang, C. - Q., Wang, L. - J., Zhu, H. - Y., Da Zeng, Y. -, and Guo, W. - Z., Control of cotton fibre elongation by a homeodomain transcription factor GhHOX3, Nature communications, vol. 5, 2014.
C. N. Passow, Bronikowski, A. M., Blackmon, H., Parsai, S., Schwartz, T. S., and McGaugh, S. E., Contrasting patterns of rapid molecular evolution within the p53 network across mammal and sauropsid lineages, Genome Biology and Evolution, 2019.
A. Marie Gawel, Rogers, H. S., Miller, R. H., and Kerr, A. M., Contrasting ecological roles of non-native ungulates in a novel ecosystem, Royal Society Open Science, vol. 5, no. 4, p. 170151, 2018.
D. J. Crawford, Doyle, J. J., Soltis, D. E., Soltis, P. S., and Wendel, J. F., Contemporary and future studies in plant speciation, morphological/floral evolution and polyploidy: honouring the scientific contributions of Leslie D. Gottlieb to plant evolutionary biology, Philosophical Transactions of the Royal Society B: Biological Sciences, vol. 369, no. 1648, p. 20130341, 2014.
D. J. Crawford, Doyle, J. J., Soltis, D. E., Soltis, P. S., and Wendel, J. F., Contemporary and future studies in plant speciation, 2014.
J. Derek Scasta, Duchardt, C., Engle, D. M., Miller, J. R., Debinski, D. M., and Harr, R. N., Constraints to restoring fire and grazing ecological processes to optimize grassland vegetation structural diversity, Ecological Engineering, vol. 95, pp. 865-875, 2016.
E. W. Seabloom, Moloney, K. A., and van der Valk, A. G., Constraints on the establishment of plants along a fluctuating water-depth gradient, Ecology, vol. 82, no. 8, pp. 2216-2232, 2001.
J. W. Leff, Jones, S. E., Prober, S. M., Barberán, A., Borer, E. T., Firn, J. L., W Harpole, S., Hobbie, S. E., Hofmockel, K. S., and Knops, J. M. H., Consistent responses of soil microbial communities to elevated nutrient inputs in grasslands across the globe, Proceedings of the National Academy of Sciences, p. 201508382, 2015.
S. M. Rehan, Glastad, K. M., Steffen, M. A., Fay, C. R., Hunt, B. G., and Toth, A. L., Conserved genes underlie phenotypic plasticity in an incipiently social bee, Genome Biology and Evolution, 2018.
L. Ries, Debinski, D. M., and Wieland, M. L., Conservation value of roadside prairie restoration to butterfly communities, Conservation Biology, vol. 15, no. 2, pp. 401-411, 2001.
J. E. Buhay, Serb, J. M., C Dean, R. E. N. É. E., Parham, Q. S. H. E. Q. U. I. L. L. A., and Lydeard, C., Conservation genetics of two endangered unionid bivalve species, Epioblasma florentina walkeri and E. capsaeformis (Unionidae: Lampsilini), Journal of Molluscan Studies, vol. 68, no. 4, pp. 385-392, 2002.
D. M. Debinski and Cross, M. S., Conservation and Global Climate Change, 2008.
J. L. Hamrick and Nason, J. D., Consequences of dispersal in plants, Population dynamics in ecological space and time, vol. 1, p. 203, 1996.
F. Jeltsch, Moloney, K. A., Schwager, M., Körner, K., and Blaum, N., Consequences of correlations between habitat modifications and negative impact of climate change for regional species survival, Agriculture, ecosystems & environment, vol. 145, no. 1, pp. 49-58, 2011.
D. Allen McGranahan, Daigh, A. L., Veenstra, J. J., Engle, D. M., Miller, J. R., and Debinski, D. M., Connecting Soil Organic Carbon and Root Biomass with Land-Use and Vegetation in Temperate Grassland, The Scientific World Journal, vol. 2014, 2014.
T. Seelanan, Schnabel, A., and Wendel, J. F., Congruence and consensus in the cotton tribe (Malvaceae), Systematic Botany, pp. 259-290, 1997.
J. M. Serb and M Barnhart, C., Congruence and Conflict Between Molecular and Reproductive Characters When Assessing Biological Diversity in the Western Fanshell Cyprogenia aberti (Bivalvia, Unionidae) 1, Annals of the Missouri Botanical Garden, vol. 95, no. 2, pp. 248-261, 2008.
L. Gong, Kakrana, A., Arikit, S., Meyers, B. C., and Wendel, J. F., Composition and expression of conserved microRNA genes in diploid cotton (Gossypium) species, Genome biology and evolution, vol. 5, no. 12, pp. 2449-2459, 2013.
J. Deitloff, Petersen, J. D., and Adams, D. C., Complex species interactions lead to unpredictable outcomes in Plethodon, Herpetologica, vol. 69, no. 1, pp. 1-10, 2013.
J. M. Serb and Lydeard, C., Complete mtDNA sequence of the North American freshwater mussel, Lampsilis ornata (Unionidae): an examination of the evolution and phylogenetic utility of mitochondrial genome organization in Bivalvia (Mollusca), Molecular Biology and Evolution, vol. 20, no. 11, pp. 1854-1866, 2003.
B. S. Gaut, Clark, L. G., Wendel, J. F., and Muse, S. V., Comparisons of the molecular evolutionary process at rbcL and ndhF in the grass family (Poaceae)., Molecular Biology and Evolution, vol. 14, no. 7, pp. 769-777, 1997.
J. W. Raich, Bowden, R. D., and Steudler, P. A., Comparison of two static chamber techniques for determining carbon dioxide efflux from forest soils, Soil Science Society of America Journal, vol. 54, no. 6, pp. 1754-1757, 1990.
D. C. Adams and Collyer, M. L., On the comparison of the strength of morphological integration across morphometric datasets, Evolution, 2016.
J. M. Orlofske, Ohnesorg, W. J., and Debinski, D. M., A comparison of the arthropod communities in remnant, restored, and reconstructed Iowa tallgrass prairies, Natural Areas Journal, vol. 31, no. 2, pp. 148-155, 2011.
M. Dornbush, Cambardella, C., Ingham, E., and Raich, J., A comparison of soil food webs beneath C3-and C4-dominated grasslands, Biology and Fertility of Soils, vol. 45, no. 1, pp. 73-81, 2008.
E. Hasler Saveraid, Debinski, D. M., Kindscher, K., and Jakubauskas, M. E., A comparison of satellite data and landscape variables in predicting bird species occurrences in the Greater Yellowstone Ecosystem, USA, Landscape Ecology, vol. 16, no. 1, pp. 71-83, 2001.
Y. Jin Chun, Nason, J. D., and Moloney, K. A., Comparison of quantitative and molecular genetic variation of native vs. invasive populations of purple loosestrife (Lythrum salicaria L., Lythraceae), Molecular Ecology, vol. 18, no. 14, pp. 3020-3035, 2009.
D. C. Adams and Naylor, G. J. P., A Comparison of Methods for Assessing the Structural Similarity of Proteins, in Mathematical Methods for Protein Structure Analysis and Design, Springer Berlin Heidelberg, 2003, pp. 109-115.
Y. Jin Chun, Kim, C. - G., and Moloney, K. A., Comparison of life history traits between invasive and native populations of purple loosestrife (Lythrum salicaria) using nonlinear mixed effects model, Aquatic Botany, vol. 93, no. 4, pp. 221-226, 2010.
D. C. Adams, Comparing evolutionary rates for different phenotypic traits on a phylogeny using likelihood, Systematic biology, p. sys083, 2012.
A. N. Pairett and Serb, J. M., Comparative transcriptomics: A study using the mirror eye of the scallop, Argopecten irradians, INTEGRATIVE AND COMPARATIVE BIOLOGY, vol. 51. OXFORD UNIV PRESS INC JOURNALS DEPT, 2001 EVANS RD, CARY, NC 27513 USA, pp. E234-E234, 2011.
T. D. Leandro, Scatena, V. L., and Clark, L. G., Comparative leaf blade anatomy and micromorphology in the systematics and phylogeny of Bambusoideae (Poaceae: Poales), Botanical Journal of the Linnean Society, 2019.
M. B. Hufford, Comparative genomics provides insight into maize adaptation in temperate regions, Genome Biology, vol. 17, no. 1, p. 1, 2016.
C. L. Brubaker, Paterson, A. H., and Wendel, J. F., Comparative genetic mapping of allotetraploid cotton and its diploid progenitors, Genome, vol. 42, no. 2, pp. 184-203, 1999.
M. - J. Yoo and Wendel, J. F., Comparative evolutionary and developmental dynamics of the cotton (Gossypium hirsutum) fiber transcriptome, 2014.
W. L. Applequist, Cronn, R., and Wendel, J. F., Comparative development of fiber in wild and cultivated cotton, Evolution & development, vol. 3, no. 1, pp. 3-17, 2001.

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