Publications

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2017
S. Weiner, Geffre, A., and Toth, A. Lynn, Functional genomics in the wild: A case study with paper wasps shows challenges and prospects for RNA-interference in ecological systems, Genome, no. ja, 2017.
M. Branstetter, Childers, A. K., Cox-Foster, D., Hopper, K. R., Kapheim, K. M., Toth, A. L., and Worley, K. C., Genomes of the Hymenoptera, Current Opinion in Insect Science, 2017.
P. Bilinski, Han, Y., Hufford, M. B., Lorant, A., Zhang, P., Estep, M. C., Jiang, J., and Ross-Ibarra, J., Genomic abundance is not predictive of tandem repeat localization in grass genomes, PloS one, vol. 12, no. 6, p. e0177896, 2017.
Z. Yu, Wang, J., Liu, S., Rentch, J. S., Sun, P., and Lu, C., Global gross primary productivity and water use efficiency changes under drought stress, Environmental Research Letters, vol. 12, no. 1, p. 014016, 2017.
B. Zhang, Tian, H., Lu, C., Dangal, S. R. S., Yang, J., and Pan, S., Global manure nitrogen production and application in cropland during 1860–2014: a 5 arcmin gridded global dataset for Earth system modeling, Earth System Science Data, vol. 9, no. 2, pp. 667-678, 2017.
C. Lu and Tian, H., Global nitrogen and phosphorus fertilizer use for agriculture production in the past half century: shifted hot spots and nutrient imbalance, Earth System Science Data, vol. 9, no. 1, p. 181, 2017.
L. Wang, Beissinger, T. Mathes, Lorant, A., Ross-Ibarra, C., Ross-Ibarra, J., and Hufford, M., The interplay of demography and selection during maize domestication and expansion, bioRxiv, p. 114579, 2017.
J. M. Pleasants, Zalucki, M. P., Oberhauser, K. S., Brower, L. P., Taylor, O. R., and Thogmartin, W. E., Interpreting surveys to estimate the size of the monarch butterfly population: Pitfalls and prospects., PloS one, vol. 12, no. 7, p. e0181245, 2017.
J. M. Jandt, Suryanarayanan, S., Hermanson, J. C., Jeanne, R. L., and Toth, A. L., Maternal and nourishment factors interact to influence offspring developmental trajectories in social wasps, Proc. R. Soc. B, vol. 284, no. 1857. The Royal Society, p. 20170651, 2017.
E. A. Addis, Gangloff, E. J., Palacios, M. G., Carr, K. E., and Bronikowski, A. M., Merging the “Morphology–Performance–Fitness” Paradigm and Life-History Theory in the Eagle Lake Garter Snake Research Project, Integrative and Comparative Biology, 2017.
S. R. S. Dangal, Tian, H., Zhang, B., Pan, S., Lu, C., and Yang, J., Methane emission from global livestock sector during 1890‐2014: magnitude, trends and spatio‐temporal patterns, Global Change Biology, 2017.
Z. Chen, Grover, C. E., Li, P., Wang, Y., Nie, H., Zhao, Y., Wang, M., Liu, F., Zhou, Z., and Wang, X., Molecular evolution of the plastid genome during diversification of the cotton genus, Molecular Phylogenetics and Evolution, 2017.
V. Pocius, Debinski, D., and Hellmich, R., Monarch Oviposition and Larval Survival on Nine Native Milkweed Species During the 2016 Breeding Season, Farm Progress Reports, vol. 2016, no. 1, p. 73, 2017.
D. C. Adams and Collyer, M. L., Multivariate Phylogenetic Comparative Methods: Evaluations, Comparisons, and Recommendations, Systematic Biology, 2017.
E. C. Fricke, Tewksbury, J. J., Wandrag, E. M., and Rogers, H. S., Mutualistic strategies minimize coextinction in plant–disperser networks, Proc. R. Soc. B, vol. 284, no. 1854. The Royal Society, p. 20162302, 2017.
D. C. Adams, Korneisel, D., Young, M., and Nistri, A., Natural History Constrains the Macroevolution of Foot Morphology in European Plethodontid Salamanders, The American Naturalist, vol. 190, no. 2, pp. 000-000, 2017.
D. Delaney, Janzen, F. J., and Warner, D. A., Nesting stage and distance to refuge influence terrestrial nesting behavior in an aquatic turtle, Canadian Journal of Zoology, no. ja, 2017.
L. Biederman, Mortensen, B., Fay, P., Hagenah, N., Knops, J., La Pierre, K., Laungani, R., Lind, E., McCulley, R., and Power, S., Nutrient addition shifts plant community composition towards earlier flowering species in some prairie ecoregions in the US Central Plains, PloS one, vol. 12, no. 5, p. e0178440, 2017.
S. J. Hall, Huang, W., and Hammel, K. E., An optical method for carbon dioxide isotopes and mole fractions in small gas samples: Tracing microbial respiration from soil, litter, and lignin, Rapid Communications in Mass Spectrometry, 2017.
W. Huang and Hall, S. J., Optimized high-throughput methods for quantifying iron biogeochemical dynamics in soil, Geoderma, vol. 306, pp. 67-72, 2017.
R. Gabor, Hall, S., Eiriksson, D., Jameel, Y., Millington, M., Stout, T., Barnes, M., Gelderloos, A., Tennant, H., and Bowen, G., Persistent urban impacts on surface waterPersistent urban impacts on surface water quality via impacted groundwater in Red Butte Creek, 2017.
R. S. Gabor, Hall, S. J., Eiriksson, D., Jameel, Y., Millington, M., Stout, T., Barnes, M. L., Gelderloos, A., Tennant, H., and Bowen, G. J., Persistent urban influence on surface water quality via impacted groundwater, Environmental Science & Technology, 2017.
D. C. Adams and Nason, J. D., A phylogenetic comparative method for evaluating trait coevolution across two phylogenies for sets of interacting species, Evolution, 2017.
J. M. Serb, Sherratt, E., Alejandrino, A., and Adams, D. C., Phylogenetic convergence and multiple shell shape optima for gliding scallops (Bivalvia: Pectinidae), Journal of Evolutionary Biology, 2017.
A. Lorant, Perdersen, S., Holst, I., Hufford, M. B., Winter, K., Piperno, D., and Ross-Ibarra, J., The Potential Role of Genetic Assimilation during Maize Domestication, bioRxiv, p. 105940, 2017.
E. K. Moody and Lozano‐Vilano, Mde Lourdes, Predation drives morphological convergence in the Gambusia panuco species group among lotic and lentic habitats, Journal of evolutionary biology, 2017.
R. Literman, Burrett, A., Bista, B., and Valenzuela, N., Putative Independent Evolutionary Reversals from Genotypic to Temperature-Dependent Sex Determination are Associated with Accelerated Evolution of Sex-Determining Genes in Turtles, Journal of Molecular Evolution, pp. 1-16, 2017.
W. E. Thogmartin, López-Hoffman, L., Rohweder, J., Diffendorfer, J., Drum, R., Semmens, D., Black, S., Caldwell, I., Cotter, D., and Drobney, P., Restoring monarch butterfly habitat in the Midwestern US:‘all hands on deck’, 2017.
E. M. Wandrag, Dunham, A. E., Duncan, R. P., and Rogers, H. S., Seed dispersal increases local species richness and reduces spatial turnover of tropical tree seedlings, Proceedings of the National Academy of Sciences, p. 201709584, 2017.
E. J. Gangloff, Reding, D. M., Bertolatus, D., Reigel, C. J., Gagliardi-Seeley, J. L., and Bronikowski, A. M., Snakes in the City: Population Structure of Sympatric Gartersnakes (Thamnophis spp.) in an Urban Landscape, Herpetological Conservation and Biology, vol. 12, no. 2, pp. 509-521, 2017.
X. Xu, H Polley, W., Hofmockel, K., and Wilsey, B. J., Species composition but not diversity explains recovery from the 2011 drought in Texas grasslands, Ecosphere, vol. 8, no. 3, 2017.
J. W. Raich, Temporal Variability of Soil Respiration in Experimental Tree Plantations in Lowland Costa Rica, Forests, vol. 8, no. 2, p. 40, 2017.
A. J. Tanentzap, Kielstra, B. W., Wilkinson, G. M., Berggren, M., Craig, N., del Giorgio, P. A., Grey, J., Gunn, J. M., Jones, S. E., and Karlsson, J., Terrestrial support of lake food webs: Synthesis reveals controls over cross-ecosystem resource use, Science Advances, vol. 3, no. 3, p. e1601765, 2017.
S. Radhakrishnan, Literman, R., Neuwald, J., Severin, A., and Valenzuela, N., Transcriptomic responses to environmental temperature by turtles with temperature-dependent and genotypic sex determination assessed by RNAseq inform the genetic architecture of embryonic gonadal development, PloS one, vol. 12, no. 3, p. e0172044, 2017.
A. C. Geffre, Liu, R., Manfredini, F., Beani, L., Kathirithamby, J., Grozinger, C. M., and Toth, A. L., Transcriptomics of an extended phenotype: parasite manipulation of wasp social behaviour shifts expression of caste-related genes, Proc. R. Soc. B, vol. 284, no. 1852. The Royal Society, p. 20170029, 2017.
K. Kane, Debinski, D., Anderson, C., Scasta, J. Derek, Engle, D., and Miller, J., Using Regional Climate Projections to Guide Grassland Community Restoration in the Face of Climate Change, Frontiers in Plant Science, vol. 8, p. 730, 2017.
S. Hall, Wegner, M. S., Hardy, J., and Workman, M., Valuing energy futures; a comparative analysis of value pools across UK energy system scenarios, Applied Energy, 2017.
J. Bohórquez-Herrera, Aurioles-Gamboa, D., Hernandez-Camacho, C., and Adams, D. C., Variability in the Skull Morphology of Adult Male California Sea Lions and Galapagos Sea Lions, in Tropical pinnipeds: Bio-ecology, threats and conservation, CRC Press, 2017, pp. 22-49.
J. L. Berl, Flaherty, E. A., Danielson, B. J., Kellner, K. F., and Swihart, R. K., Winter ecology of prairie deer mice (Peromyscus maniculatus bairdii) in cultivated habitats: Implications for agricultural ecosystem services, Agriculture, Ecosystems & Environment, vol. 249, pp. 130-136, 2017.
2018
J. M. Saarela, Burke, S. V., Wysocki, W. P., Barrett, M. D., Clark, L. G., Craine, J. M., Peterson, P. M., Soreng, R. J., Vorontsova, M. S., and Duvall, M. R., A 250 plastome phylogeny of the grass family (Poaceae): topological support under different data partitions, PeerJ, vol. 6, p. e4299, 2018.
F. J. Janzen, Hoekstra, L. A., Brooks, R. J., Carroll, D. M., J Gibbons, W., Greene, J. L., Iverson, J. B., Litzgus, J. D., Michael, E. D., and Parren, S. G., Altered spring phenology of North American freshwater turtles and the importance of representative populations, Ecology and Evolution, 2018.
E. K. Moody, Carson, E. W., Corman, J. R., and Espinosa-Pérez, H., Animal-Mediated Nutrient Cycling in Aquatic Ecosystems of the Cuatro Ciénegas Basin, in Ecosystem Ecology and Geochemistry of Cuatro Cienegas, Springer, 2018, pp. 141-152.
M. Kalcic, Crumpton, W., Liu, X., D'Ambrosio, J., Ward, A., and Witter, J., Assessment of beyond-the-field nutrient management practices for agricultural crop systems with subsurface drainage, Journal of Soil and Water Conservation, vol. 73, no. 1, pp. 62-74, 2018.
F. Manfredini, Brown, M. J. F., and Toth, A. L., Candidate genes for cooperation and aggression in the social wasp Polistes dominula, Journal of Comparative Physiology A, pp. 1-15, 2018.
V. Muthye and Lavrov, D. V., Characterization of mitochondrial proteomes of nonbilaterian animals, IUBMB life, 2018.
S. M. Rehan, Glastad, K. M., Steffen, M. A., Fay, C. R., Hunt, B. G., and Toth, A. L., Conserved genes underlie phenotypic plasticity in an incipiently social bee, Genome Biology and Evolution, 2018.
A. Marie Gawel, Rogers, H. S., Miller, R. H., and Kerr, A. M., Contrasting ecological roles of non-native ungulates in a novel ecosystem, Royal Society Open Science, vol. 5, no. 4, p. 170151, 2018.
C. Li, Sun, X., Conover, J. L., Zhang, Z., Wang, J., Wang, X., Deng, X., Wang, H., Liu, B., and Wendel, J. F., Cytonuclear coevolution following homoploid hybrid speciation in Aegilops tauschii, Molecular Biology and Evolution, 2018.
G. A. Cordero, Quinteros, K., and Janzen, F. J., Delayed trait development and the convergent evolution of shell kinesis in turtles, Proc. R. Soc. B, vol. 285, no. 1888, p. 20181585, 2018.
W. A. N. G. Kunbo, Wendel, J. F., and Jinping, H. U. A., Designations for individual genomes and chromosomes in Gossypium, Journal of Cotton Research, vol. 1, no. 1, p. 3, 2018.

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