Publications

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M. L. Cayuela, Aguilera, E., Sanz-Cobena, A., Adams, D. C., Abalos, D., Barton, L., Ryals, R., Silver, W. L., Alfaro, M. A., and Pappa, V. A., Direct nitrous oxide emissions in Mediterranean climate cropping systems: Emission factors based on a meta-analysis of available measurement data, Agriculture, Ecosystems & Environment, 2016.
C. I. Castillo-Davis, Miller, D. J., Ball, E. E., Technau, U., Adams, K. L., Wendel, J. F., Neeman, Y., Dahary, D., Levanon, E. Y., and Sorek, R., 553 Multievidence microarray mining, Genetics, vol. 21, no. 10, pp. 533-582, 2005.
J. M. Casacuberta, Jackson, S., Panaud, O., Purugganan, M., and Wendel, J., Evolution of plant phenotypes, from genomes to traits. G3: Genes, Genomes, Genetics, 2016.
J. C. Caruthers and Debinski, D., Montane Meadow Butterfly Species Distributions in the Greater Yellowstone Ecosystem, University of Wyoming National Park Service Research Center Annual Report, vol. 30, no. 1, pp. 85-96, 2006.
J. C. Caruthers, Debinski, D. M., and Whickam, H., CHAPTER TWO: BUTTERFLY INDICATORS OF MONTANE MEADOWS ALONG A HYDROLOGICAL GRADIENT: RESPONSES FROM A SPATIAL AND TEMPORAL SCALE, Butterfly Community Temporal Trends and Responses to Resource Availability Along a Hydrologic Gradient of Montane Meadows, p. 8, 2008.
J. C. Caruthers and Debinski, D. M., CHAPTER THREE: BUTTERFLY RESPONSES TO FLORAL AND HOST PLANT RESOURCES IN MONTANE MEADOWS, Butterfly Community Temporal Trends and Responses to Resource Availability Along a Hydrologic Gradient of Montane Meadows, p. 30, 2008.
N. M. Caruso, Sears, M. W., Adams, D. C., and Lips, K. R., Widespread rapid reductions in body size of adult salamanders in response to climate change, Global change biology, vol. 20, no. 6, pp. 1751-1759, 2014.
A. L. Carter, Bodensteiner, B. L., Iverson, J. B., Milne‐Zelman, C. L., Mitchell, T. S., Refsnider, J. M., Warner, D. A., and Janzen, F. J., Breadth of the thermal response captures individual and geographic variation in temperature‐dependent sex determination, Functional Ecology, 2019.
J. Carrillo-Tripp, Dolezal, A. G., Goblirsch, M. J., W Miller, A., Toth, A. L., and Bonning, B. C., In vivo and in vitro infection dynamics of honey bee viruses, Scientific Reports, vol. 6, p. 22265, 2016.
B. J. Cardinale, Gross, K., Fritschie, K., Flombaum, P., Fox, J. W., Rixen, C., van Ruijven, J., Reich, P. B., Scherer-Lorenzen, M., and Wilsey, B. J., Biodiversity simultaneously enhances the production and stability of community biomass, but the effects are independent, Ecology, vol. 94, no. 8, pp. 1697-1707, 2013.
D. C. Campbell, Serb, J. M., Buhay, J. E., Roe, K. J., Minton, R. L., and Lydeard, C., Phylogeny of North American amblemines (Bivalvia, Unionoida): prodigious polyphyly proves pervasive across genera, Invertebrate Biology, vol. 124, no. 2, pp. 131-164, 2005.
D. C. Campbell, Johnson, P. D., Williams, J. D., Rindsberg, A. K., Serb, J. M., Small, K. K., and Lydeard, C., Identification of ‘extinct’freshwater mussel species using DNA barcoding, Molecular Ecology Resources, vol. 8, no. 4, pp. 711-724, 2008.
W. J. Caldecutt and Adams, D. C., Morphometrics of trophic osteology in the threespine stickleback, Gasterosteus aculeatus, Copeia, pp. 827-838, 1998.
J. M. Calabrese, Ries, L., Matter, S. F., Debinski, D. M., Auckland, J. N., Roland, J., and Fagan, W. F., Reproductive asynchrony in natural butterfly populations and its consequences for female matelessness, Journal of Animal Ecology, vol. 77, no. 4, pp. 746-756, 2008.
B
K. M. Butterworth, Adams, D. C., Horner, H. T., and Wendel, J. F., Initiation and early development of fiber in wild and cultivated cotton, International Journal of Plant Sciences, vol. 170, no. 5, pp. 561-574, 2009.
S. Vincent Burke, Lin, C. - S., Wysocki, W. Patrick, Clark, L. G., and Duvall, M. R., Phylogenomics and plastome evolution of tropical forest grasses (Leptaspis, Streptochaeta: Poaceae), Frontiers in Plant Science, vol. 7, p. 1993, 2016.
T. Bureau, Hawkins, J. S., Hu, G., Rapp, R. A., Grafenberg, J. L., and Wendel, J. F., Phylogenetic determination of the pace of transposable element proliferation in plants: copia and LINE-like elements in Gossypium, Genome, vol. 51, no. 1, pp. 11-18, 2007.
T. Bureau, Hu, G., Hawkins, J. S., Grover, C. E., and Wendel, J. F., The history and disposition of transposable elements in polyploid Gossypium, Genome, vol. 53, no. 8, pp. 599-607, 2010.
J. E. Buhay, Serb, J. M., C Dean, R. E. N. É. E., Parham, Q. S. H. E. Q. U. I. L. L. A., and Lydeard, C., Conservation genetics of two endangered unionid bivalve species, Epioblasma florentina walkeri and E. capsaeformis (Unionidae: Lampsilini), Journal of Molluscan Studies, vol. 68, no. 4, pp. 385-392, 2002.
R. J. A. Buggs, Wendel, J. F., Doyle, J. J., Soltis, D. E., Soltis, P. S., and Coate, J. E., The legacy of diploid progenitors in allopolyploid gene expression patterns, Philosophical Transactions of the Royal Society B: Biological Sciences, vol. 369, no. 1648, p. 20130354, 2014.
C. L. Brubaker, Bourland, F. M., and Wendel, J. F., The origin and domestication of cotton, Cotton: Origin, history, technology, and production. John Wiley & Sons, New York, pp. 3-31, 1999.
C. L. Brubaker, Paterson, A. H., and Wendel, J. F., Comparative genetic mapping of allotetraploid cotton and its diploid progenitors, Genome, vol. 42, no. 2, pp. 184-203, 1999.
C. L. Brubaker and Wendel, J. F., Reevaluating the origin of domesticated cotton (Gossypium hirsutum; Malvaceae) using nuclear restriction fragment length polymorphisms (RFLPs), American journal of botany, pp. 1309-1326, 1994.
C. L. Brubaker, Koontz, J. A., and Wendel, J. F., Bidirectional cytoplasmic and nuclear introgression in the New World cottons, Gossypium barbadense and G. hirsutum (Malvaceae), American Journal of Botany, pp. 1203-1208, 1993.
C. L. Brubaker and Wendel, J. F., On the specific status of Gossypium lanceolatum Todaro, Genetic Resources and Crop Evolution, vol. 40, no. 3, pp. 165-170, 1993.
C. L. Brubaker and Wendel, J. F., RFLP diversity in cotton, Genetic improvement of cotton, emerging technologies. Science Publisher, Inc, Enfield, NH, pp. 81-101, 2001.
S. Brown, Hall, C. A. S., Knabe, W., Raich, J., Trexler, M. C., and Woomer, P., Tropical forests: their past, present, and potential future role in the terrestrial carbon budget, Water, Air, and Soil Pollution, vol. 70, no. 1-4, pp. 71-94, 1993.
A. M. Bronikowski, Cords, M., Alberts, S. C., Altmann, J., Brockman, D. K., Fedigan, L. M., Pusey, A., Stoinski, T., Strier, K. B., and Morris, W. F., Female and male life tables for seven wild primate species, Scientific Data, vol. 3, 2016.
P. K. Bretting and Wendel, J. F., Utility of Tpi3 and Tpi4 variants in quality control of hybrid popcorn seed production., Maize Genetics Cooperation News Letter, no. 64, pp. 121-122, 1990.
M. Branstetter, Childers, A. K., Cox-Foster, D., Hopper, K. R., Kapheim, K. M., Toth, A. L., and Worley, K. C., Genomes of the Hymenoptera, Current Opinion in Insect Science, 2017.
B. S. Bowen, Debinski, D. M., and Janzen, F. J., OPS 5-1: Evolution of institutional cultures to diversify the professoriate, The 95th ESA Annual Meeting, 2010.
B. S. Bowen, Debinski, D. M., and Janzen, F. J., EVOLUTION OF INSTITUTIONAL CULTURE TO DIVERSIFY THE PROFESSORIATE, 2010.
J. Bohórquez-Herrera, Aurioles-Gamboa, D., Hernandez-Camacho, C., and Adams, D. C., Variability in the Skull Morphology of Adult Male California Sea Lions and Galapagos Sea Lions, in Tropical pinnipeds: Bio-ecology, threats and conservation, CRC Press, 2017, pp. 22-49.
J. Bohórquez-Herrera, Cruz-Escalona, V. H., Adams, D. C., and Peterson, M. S., Feeding ecomorphology of seven demersal marine fish species in the Mexican Pacific Ocean, Environmental Biology of Fishes, vol. 98, no. 5, pp. 1459-1473, 2015.
M. Bohlke and Wendel, J. F., A possible hybrid in the genus Hieracium., 1976.
B. L. Bodensteiner, Warner, D. A., Iverson, J. B., Milne‐Zelman, C. L., Mitchell, T. S., Refsnider, J. M., and Janzen, F. J., Geographic variation in thermal sensitivity of early life traits in a widespread reptile, Ecology and Evolution, 2019.
T. Blankers, Adams, D. C., and Wiens, J. J., Ecological radiation with limited morphological diversification in salamanders, Journal of evolutionary biology, vol. 25, no. 4, pp. 634-646, 2012.
N. Bjarnholt, Nakonieczny, M., Kędziorski, A., Debinski, D. M., Matter, S. F., Olsen, C. Erik, and Zagrobelny, M., Occurrence of sarmentosin and other hydroxynitrile glucosides in Parnassius (Papilionidae) butterflies and their food plants, Journal of chemical ecology, vol. 38, no. 5, pp. 525-537, 2012.
P. Bilinski, Han, Y., Hufford, M. B., Lorant, A., Zhang, P., Jiang, J., and Ross-Ibarra, J., Diverse origins of high copy tandem repeats in grass genomes, PeerJ Preprints, 2016.
P. Bilinski, Han, Y., Hufford, M. B., Lorant, A., Zhang, P., Estep, M. C., Jiang, J., and Ross-Ibarra, J., Genomic abundance is not predictive of tandem repeat localization in grass genomes, PloS one, vol. 12, no. 6, p. e0177896, 2017.
L. Biederman, Mortensen, B., Fay, P., Hagenah, N., Knops, J., La Pierre, K., Laungani, R., Lind, E., McCulley, R., and Power, S., Nutrient addition shifts plant community composition towards earlier flowering species in some prairie ecoregions in the US Central Plains, PloS one, vol. 12, no. 5, p. e0178440, 2017.
L. A. Biederman, Phelps, J., Ross, B. J., Polzin, M., and Harpole, W. S., Biochar and manure alter few aspects of prairie development: A field test, Agriculture, Ecosystems & Environment, vol. 236, pp. 78-87, 2017.
D. Bhattacharya, Lutzoni, F., Reeb, V., Simon, D., Nason, J., and Fernandez, F., Widespread occurrence of spliceosomal introns in the rDNA genes of ascomycetes, Molecular Biology and Evolution, vol. 17, no. 12, pp. 1971-1984, 2000.
L. Betancur, Singh, B., Rapp, R. A., Wendel, J. F., M Marks, D., Roberts, A. W., and Haigler, C. H., Phylogenetically distinct cellulose synthase genes support secondary wall thickening in arabidopsis shoot trichomes and cotton fiber, Journal of integrative plant biology, vol. 52, no. 2, pp. 205-220, 2010.
C. M. Berns and Adams, D. C., Bill shape and sexual shape dimorphism between two species of temperate hummingbirds: Black-Chinned hummingbird (Archilochus alexandri) and Ruby-Throated hummingbird (A. colubris), The Auk, vol. 127, no. 3, pp. 626-635, 2010.
C. M. Berns and Adams, D. C., Becoming different but staying alike: patterns of sexual size and shape dimorphism in bills of hummingbirds, Evolutionary Biology, vol. 40, no. 2, pp. 246-260, 2013.
D. Berner, Adams, D. C., GRANDCHAMP, A. ‐C., and Hendry, A. P., Natural selection drives patterns of lake–stream divergence in stickleback foraging morphology, Journal of evolutionary biology, vol. 21, no. 6, pp. 1653-1665, 2008.
J. L. Berl, Flaherty, E. A., Danielson, B. J., Kellner, K. F., and Swihart, R. K., Winter ecology of prairie deer mice (Peromyscus maniculatus bairdii) in cultivated habitats: Implications for agricultural ecosystem services, Agriculture, Ecosystems & Environment, vol. 249, pp. 130-136, 2017.
A. J. Berens, Tibbetts, E. A., and Toth, A. L., Cognitive specialization for learning faces is associated with shifts in the brain transcriptome of a social wasp, Journal of Experimental Biology, vol. 220, no. 12, pp. 2149-2153, 2017.
A. J. Berens, Tibbetts, E. A., and Toth, A. L., Candidate genes for individual recognition in Polistes fuscatus paper wasps, Journal of Comparative Physiology A, pp. 1-15, 2015.

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