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J. William Raich, “Canopy Openings, Seed Germination, and Tree Regeneration in Malaysian Coastal Hill Dipterocarp Forest”, Dissertation, Duke University, Durham, North Carolina, USA., 1987.

C. M. Litton, Raich, J. W., and Ryan, M. G., “Carbon allocation in forest ecosystems”, Global Change Biology, vol. 13, no. 10, pp. 2089-2109, 2007.

J. W. Raich, “Carbon budget of a tropical soil under mature wet forest and young vegetation.”, University of Florida, Gainesville, FL, USA., 1983.

E. S. A. Home, “Carbon Dynamics in the Tropics”, 2010.

G. Mora and Raich, J. W., “Carbon‐isotopic composition of soil‐respired carbon dioxide in static closed chambers at equilibrium”, Rapid communications in mass spectrometry, vol. 21, no. 12, pp. 1866-1870, 2007.

J. O. Stireman, Nason, J. D., Heard, S. B., and Seehawer, J. M., “Cascading host-associated genetic differentiation in parasitoids of phytophagous insects”, Proceedings of the Royal Society of London B: Biological Sciences, vol. 273, no. 1586, pp. 523-530, 2006.

E. C. Webb, Mendelssohn, I. A., and Wilsey, B. J., “Causes for vegetation dieback in a Louisiana salt marsh: a bioassay approach”, Aquatic Botany, vol. 51, no. 3, pp. 281-289, 1995.

R. E. Masonbrink, Gallagher, J. P., Jareczek, J. J., Renny-Byfield, S., Grover, C. E., Gong, L., and Wendel, J. F., “CenH3 evolution in diploids and polyploids of three angiosperm genera”, BMC plant biology, vol. 14, no. 1, p. 383, 2014.

R. M. Maher, Asbjornsen, H., Kolka, R. K., Cambardella, C. A., and Raich, J. W., “Changes in soil respiration across a chronosequence of tallgrass prairie reconstructions”, Agriculture, ecosystems & environment, vol. 139, no. 4, pp. 749-753, 2010.

B. F. M. Olechnowski, Debinski, D. M., Drobney, P., Viste-Sparkman, K., and Reed, W. T., “Changes in vegetation structure through time in a restored tallgrass prairie ecosystem and implications for avian diversity and community composition”, Ecological Restoration, vol. 27, no. 4, pp. 449-457, 2009.

J. C. Caruthers and Debinski, D. M., “CHAPTER THREE: BUTTERFLY RESPONSES TO FLORAL AND HOST PLANT RESOURCES IN MONTANE MEADOWS”, Butterfly Community Temporal Trends and Responses to Resource Availability Along a Hydrologic Gradient of Montane Meadows, p. 30, 2008.

J. M. Jandt and Toth, A. L., “Chapter Three-Physiological and Genomic Mechanisms of Social Organization in Wasps (Family: Vespidae)”, Advances in Insect Physiology, vol. 48, pp. 95-130, 2015.

J. C. Caruthers, Debinski, D. M., and Whickam, H., “CHAPTER TWO: BUTTERFLY INDICATORS OF MONTANE MEADOWS ALONG A HYDROLOGICAL GRADIENT: RESPONSES FROM A SPATIAL AND TEMPORAL SCALE”, Butterfly Community Temporal Trends and Responses to Resource Availability Along a Hydrologic Gradient of Montane Meadows, p. 8, 2008.

R. G. Jaeger, Prosen, E. D., Adams, D. C., and Montgomery, W. L., “Character Displacement and Aggression in Two Species ofTerrestrial Salamanders”, Copeia, vol. 2002, no. 2, pp. 391-401, 2002.

D. C. Adams, “Character displacement via aggressive interference in Appalachian salamanders”, Ecology, vol. 85, no. 10, pp. 2664-2670, 2004.

J. W. Raich, Farrar, D. R., Herzberg, R. A., Sin, E. E. N. A. M., and Johnson-Groh, C. I. N. D. Y. L., “Characterization of central Iowa forests with permanent plots”, JOURNAL-IOWA ACADEMY OF SCIENCE, vol. 106, pp. 40-46, 1999.

V. Muthye and Lavrov, D. V., “Characterization of mitochondrial proteomes of nonbilaterian animals”, IUBMB life, 2018.

J. M. Serb and Eernisse, D. J., “Charting evolution’s trajectory: using molluscan eye diversity to understand parallel and convergent evolution”, Evolution: Education and Outreach, vol. 1, no. 4, pp. 439-447, 2008.

Z. Chen, Feng, K., Grover, C. E., Li, P., Liu, F., Wang, Y., Xu, Q., Shang, M., Zhou, Z., and Cai, X., “Chloroplast DNA Structural Variation, Phylogeny, and Age of Divergence among Diploid Cotton Species”, PloS one, vol. 11, no. 6, p. e0157183, 2016.

S. Radhakrishnan and Valenzuela, N., “Chromosomal context affects the molecular evolution of sex-linked genes and their autosomal counterparts in turtles and other vertebrates”, Journal of Heredity, 2017.

N. Valenzuela and Adams, D. C., “Chromosome number and sex determination coevolve in turtles”, Evolution, vol. 65, no. 6, pp. 1808-1813, 2011.

L. Hu, Xu, Z., Wang, M., Fan, R., Yuan, D., Wu, B., Wu, H., Qin, X., Yan, L., and Tan, L., “The chromosome-scale reference genome of black pepper provides insight into piperine biosynthesis”, Nature Communications, vol. 10, no. 1, pp. 1-11, 2019.

E. Ruiz-Sanchez, Mejía-Saulés, T., Cortés, G., and Clark, L. G., “Chusquea gibcooperi (Poaceae: Bambusoideae: Bambuseae: Chusqueinae), a new species endemic to Mexico”, Brittonia, pp. 1-6, 2015.

R. A. Y. S. ANDRADE, PIANISSOLA, E. V. A. N. D. R. O. M., VIDAL, K. A. I. O. V. I. N. I. C. I. U. S. D., DA MOTA, A. L. I. N. E. C. O. S. T. A., Clark, L. G., and OLIVEIRA, R. E. Y. J. A. N. E. P., “Chusquea parviligulata (Poaceae: Bambusoideae: Bambuseae): a new species of C. subg. Chusquea endemic to the Atlantic rainforest of Bahia, Brazil”, Phytotaxa, vol. 405, no. 1, pp. 27-36, 2019.

L. Attigala, FUENTES, A. L. F. R. E. D. O. F., and Clark, L. G., “Chusquea sect. Tenellae (Bambuseae, Bambusoideae, Poaceae), a taxonomic revision of a new section from South America”, Phytotaxa, vol. 324, no. 3, pp. 239-265, 2017.

E. Ruiz‐Sanchez, Castro‐Castro, A., and Clark, L. G., “Chusquea septentrionalis sp. nov.(Poaceae: Bambusoideae) from the Madrean region in Durango, Mexico”, Nordic Journal of Botany, 2017.

A. Schnabel and Wendel, J. F., “Cladistic biogeography of Gleditsia (Leguminosae) based on ndhF and rpl16 chloroplast gene sequences”, American Journal of Botany, vol. 85, no. 12, pp. 1753-1765, 1998.

M. S. Strickland, Keiser, A. D., and Bradford, M. A., “Climate history shapes contemporary leaf litter decomposition”, Biogeochemistry, vol. 122, no. 2-3, pp. 165-174, 2015.

A. D. Keiser and Bradford, M. A., “Climate masks decomposer influence in a cross-site litter decomposition study”, Soil Biology and Biochemistry, vol. 107, pp. 180-187, 2017.

M. Yoon Chung, Suh, Y., Lopez-Pujol, J., Nason, J. D., and Chung, M. Gi, “Clonal and fine-scale genetic structure in populations of a restricted Korean endemic, Hosta jonesii (Liliaceae) and the implications for conservation”, Annals of botany, vol. 96, no. 2, pp. 279-288, 2005.

B. Wilsey, “Clonal plants in a spatially heterogeneous environment: effects of integration on Serengeti grassland response to defoliation and urine-hits from grazing mammals”, Plant Ecology, vol. 159, no. 1, pp. 15-22, 2002.

M. Jakubauskas, Kindscher, K., Fraser, A., Debinski, D., and Price, K. P., “Close-range remote sensing of aquatic macrophyte vegetation cover”, International Journal of Remote Sensing, vol. 21, no. 18, pp. 3533-3538, 2000.

L. Gong, Masonbrink, R. E., Grover, C. E., Renny-Byfield, S., and Wendel, J. F., “A Cluster of Recently Inserted Transposable Elements Associated with siRNAs in”, The Plant Genome, 2015.

D. M. Debinski, Caruthers, J., Cook, D., Crowley, J., and Wickham, H., “Coenonympha haydenii Responds to Drought”, Bulletin of the Ecological Society of America, vol. 94, no. 2, pp. 182-182, 2013.

A. C. Kraemer, Serb, J. M., and Adams, D. C., “Coevolution of Coloration and Conspicuousness in a Batesian Mimic”, INTEGRATIVE AND COMPARATIVE BIOLOGY, vol. 54. OXFORD UNIV PRESS INC JOURNALS DEPT, 2001 EVANS RD, CARY, NC 27513 USA, pp. E114-E114, 2014.

A. J. Berens, Tibbetts, E. A., and Toth, A. L., “Cognitive specialization for learning faces is associated with shifts in the brain transcriptome of a social wasp”, Journal of Experimental Biology, vol. 220, no. 12, pp. 2149-2153, 2017.

C. R. I. S. T. I. E. L. L. E. DE JESUS-COSTA, VIANA, P. E. D. R. O. L., Clark, L. G., and SANTOS-GONÇALVES, A. N. A. P. A. U. L. A., “Colanthelia longipetiolata (Poaceae: Bambusoideae), a new species of woody bamboo from the Brazilian Atlantic forest”, Phytotaxa, vol. 401, no. 2, pp. 133-138, 2019.

S. M. Thomas and Moloney, K. A., “Combining the effects of surrounding land-use and propagule pressure to predict the distribution of an invasive plant”, Biological Invasions, vol. 17, no. 1, pp. 477-495, 2015.

E. Chiel, Kuslitzky, W., Corcuera, P., Valverde, P. Luis, Jiménez, M. Luisa, Ponce-Mendoza, A., De la Rosa, G., Nieto, G., Graça, M. B., and Morais, J. W., “COMMUNITY AND ECOSYSTEM ECOLOGY Diversity and Abundance of House Fly Pupal Parasitoids in Israel, with First Records of Two Spalangia”, Environmental Entomology, vol. 45, no. 2, 2016.

Y. Huang, Martin, L. M., Isbell, F. I., and Wilsey, B. J., “Is community persistence related to diversity? A test with prairie species in a long-term experiment”, Basic and Applied Ecology, vol. 14, no. 3, pp. 199-207, 2013.

Z. Chen, Zhao, J., Qiao, J., Li, W., Li, J., Xu, R., Wang, H., Liu, Z., Xing, B., and Wendel, J. F., “Comparative analysis of codon usage between Gossypium hirsutum and G. barbadense mitochondrial genomes”, Mitochondrial DNA Part B, vol. 5, no. 3, pp. 2500-2506, 2020.

W. L. Applequist, Cronn, R., and Wendel, J. F., “Comparative development of fiber in wild and cultivated cotton”, Evolution & development, vol. 3, no. 1, pp. 3-17, 2001.

M. - J. Yoo and Wendel, J. F., “Comparative evolutionary and developmental dynamics of the cotton (Gossypium hirsutum) fiber transcriptome”, 2014.

C. L. Brubaker, Paterson, A. H., and Wendel, J. F., “Comparative genetic mapping of allotetraploid cotton and its diploid progenitors”, Genome, vol. 42, no. 2, pp. 184-203, 1999.

M. B. Hufford, “Comparative genomics provides insight into maize adaptation in temperate regions”, Genome Biology, vol. 17, no. 1, p. 1, 2016.

T. D. Leandro, Scatena, V. L., and Clark, L. G., “Comparative leaf blade anatomy and micromorphology in the systematics and phylogeny of Bambusoideae (Poaceae: Poales)”, Botanical Journal of the Linnean Society, 2019.

A. N. Pairett and Serb, J. M., “Comparative transcriptomics: A study using the mirror eye of the scallop, Argopecten irradians”, INTEGRATIVE AND COMPARATIVE BIOLOGY, vol. 51. OXFORD UNIV PRESS INC JOURNALS DEPT, 2001 EVANS RD, CARY, NC 27513 USA, pp. E234-E234, 2011.

D. C. Adams, “Comparing evolutionary rates for different phenotypic traits on a phylogeny using likelihood”, Systematic biology, p. sys083, 2012.

Y. Jin Chun, Kim, C. - G., and Moloney, K. A., “Comparison of life history traits between invasive and native populations of purple loosestrife (Lythrum salicaria) using nonlinear mixed effects model”, Aquatic Botany, vol. 93, no. 4, pp. 221-226, 2010.

D. C. Adams and Naylor, G. J. P., “A Comparison of Methods for Assessing the Structural Similarity of Proteins”, in Mathematical Methods for Protein Structure Analysis and Design, Springer Berlin Heidelberg, 2003, pp. 109-115.

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