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Journal Article

M. L. Collyer and Adams, D. C., “Analysis of two-state multivariate phenotypic change in ecological studies”, Ecology, vol. 88, no. 3, pp. 683-692, 2007.

A. Lobo, Moloney, K., Chic, O., and Chiariello, N., “Analysis of fine-scale spatial pattern of a grassland from remotely-sensed imagery and field collected data”, Landscape Ecology, vol. 13, no. 2, pp. 111-131, 1998.

J. W. Raich, Parton, W. J., Russell, A. E., Jr, R. L. Sanford, and Vitousek, P. M., “Analysis of factors regulating ecosystem development on Mauna Loa using the Century model”, Biogeochemistry, vol. 51, no. 2, pp. 161-191, 2000.

D. C. Adams and Collyer, M. L., “Analysis of character divergence along environmental gradients and other covariates”, Evolution, vol. 61, no. 3, pp. 510-515, 2007.

C. V Von Mark, Nason, J. D., Luhman, R., Marek, L. F., Shoemaker, R. C., E Brummer, C., and Gardner, C. A. C., “Analysis of bulked and redundant accessions of Brassica germplasm using assignment tests of microsatellite markers”, Euphytica, vol. 152, no. 3, pp. 339-349, 2006.

D. C. Adams and Church, J. O., “Amphibians do not follow Bergmann's rule”, Evolution, vol. 62, no. 2, pp. 413-420, 2008.

F. J. Janzen, Hoekstra, L. A., Brooks, R. J., Carroll, D. M., J Gibbons, W., Greene, J. L., Iverson, J. B., Litzgus, J. D., Michael, E. D., and Parren, S. G., “Altered spring phenology of North American freshwater turtles and the importance of representative populations”, Ecology and Evolution, 2018.

R. Cronn, Brothers, M., Klier, K., Bretting, P. K., and Wendel, J. F., “Allozyme variation in domesticated annual sunflower and its wild relatives”, Theoretical and applied genetics, vol. 95, no. 4, pp. 532-545, 1997.

R. G. Percy and Wendel, J. F., “Allozyme evidence for the origin and diversification of Gossypium barbadense L.”, Theoretical and Applied Genetics, vol. 79, no. 4, pp. 529-542, 1990.

J. F. Wendel and Percy, R. G., “Allozyme diversity and introgression in the Galapagos Islands endemic Gossypium darwinii and its relationship to continental G. barbadense”, Biochemical Systematics and Ecology, vol. 18, no. 7, pp. 517-528, 1990.

J. F. Jackson, Adams, D. C., and Jackson, U. B., “Allometry of constitutive defense: a model and a comparative test with tree bark and fire regime”, The American Naturalist, vol. 153, no. 6, pp. 614-632, 1999.

K. L. Adams and Wendel, J. F., “Allele-specific, bidirectional silencing of an alcohol dehydrogenase gene in different organs of interspecific diploid cotton hybrids”, Genetics, vol. 171, no. 4, pp. 2139-2142, 2005.

A. Marck, Berthelot, G., Foulonneau, V., Marc, A., Antero-Jacquemin, J., Noirez, P., Bronikowski, A. M., Morgan, T. J., Garland, T., and Carter, P. A., “Age-Related Changes in Locomotor Performance Reveal a Similar Pattern for Caenorhabditis elegans, Mus domesticus, Canis familiaris, Equus caballus, and Homo sapiens”, The Journals of Gerontology Series A: Biological Sciences and Medical Sciences, p. glw136, 2016.

C. J. Duchardt, Miller, J. R., Debinski, D. M., and Engle, D. M., “Adapting the Fire-Grazing Interaction to Small Pastures in a Fragmented Landscape for Grassland Bird Conservation”, Rangeland Ecology & Management, 2016.

L. C. Jesse, Moloney, K. A., and Obrycki, J. J., “Abundance of arthropods on the branch tips of the invasive plant, Rosa multiflora (Rosaceae)”, Weed biology and management, vol. 6, no. 4, pp. 204-211, 2006.

J. W. Raich, Clark, D. A., Schwendenmann, L., and Wood, T. E., “Aboveground tree growth varies with belowground carbon allocation in a tropical rainforest environment”, 2014.

J. W. Raich, “Aboveground productivity and soil respiration in three Hawaiian rain forests”, Forest Ecology and Management, vol. 107, no. 1, pp. 309-318, 1998.

B. J. Wilsey and H Polley, W., “Aboveground productivity and root–shoot allocation differ between native and introduced grass species”, Oecologia, vol. 150, no. 2, pp. 300-309, 2006.

J. F. Wendel and Doyle, J., “7 Polyploidy and evolution in plants”, Plant diversity and evolution: genotypic and phenotypic variation in higher plants, p. 97, 2005.

C. I. Castillo-Davis, Miller, D. J., Ball, E. E., Technau, U., Adams, K. L., Wendel, J. F., Neeman, Y., Dahary, D., Levanon, E. Y., and Sorek, R., “553 Multievidence microarray mining”, Genetics, vol. 21, no. 10, pp. 533-582, 2005.

J. H. Hunt and Toth, A. L., “4 Sociality in Wasps”, Comparative Social Evolution, p. 84, 2017.

T. J. Gallaher, Akbar, S. Z., Klahs, P. C., Marvet, C. R., Senske, A. M., Clark, L. G., and Strömberg, C. A. E., “3D shape analysis of grass silica short cell phytoliths (GSSCP): a new method for fossil classification and analysis of shape evolution”, New Phytologist, 2020.

J. Rong, Abbey, C., Bowers, J. E., Brubaker, C. L., Chang, C., Chee, P. W., Delmonte, T. A., Ding, X., Garza, J. J., and Marler, B. S., “A 3347-locus genetic recombination map of sequence-tagged sites reveals features of genome organization, transmission and evolution of cotton (Gossypium)”, Genetics, vol. 166, no. 1, pp. 389-417, 2004.

J. M. Saarela, Burke, S. V., Wysocki, W. P., Barrett, M. D., Clark, L. G., Craine, J. M., Peterson, P. M., Soreng, R. J., Vorontsova, M. S., and Duvall, M. R., “A 250 plastome phylogeny of the grass family (Poaceae): topological support under different data partitions”, PeerJ, vol. 6, p. e4299, 2018.

R. D. Holt and Debinski, D. M., “11 Reﬂections on Landscape Experiments and Ecological Theory: Tools for the Study of Habitat”, 2003.

R. D. Holt, Debinski, D. M., DEFFENDORFER, J. E., and WARD, G. C., “10 Perspectives from an Experimental Study of Habitat Fragmentation in an Agroecosystem”, Ecology and integrated farming systems: proceedings of the 13th Long Ashton International Symposium, p. 147, 1995.

Conference Proceedings

J. M. Serb, Krause-Porath, A. J., and Pairett, A. N., “Uncovering patterns underlying the molecular evolution of non-visual photoreception in molluscs”, INTEGRATIVE AND COMPARATIVE BIOLOGY, vol. 54. OXFORD UNIV PRESS INC JOURNALS DEPT, 2001 EVANS RD, CARY, NC 27513 USA, pp. E189-E189, 2014.

J. M. Serb and Krause, A. J., “Uncovering gene family expansion and molecular convergence of the photoreceptive protein opsin in scallop (Bivalvia: Pectinidae)”, INTEGRATIVE AND COMPARATIVE BIOLOGY, vol. 53. OXFORD UNIV PRESS INC JOURNALS DEPT, 2001 EVANS RD, CARY, NC 27513 USA, pp. E194-E194, 2013.

A. C. Geffre, Liu, R., Manfredini, F., Beani, L., Kathirithamby, J., Grozinger, C. M., and Toth, A. L., “Transcriptomics of an extended phenotype: parasite manipulation of wasp social behaviour shifts expression of caste-related genes”, Proc. R. Soc. B, vol. 284, no. 1852. The Royal Society, p. 20170029, 2017.

C. R. Parks, Wendel, J. F., Sewell, M. M., and He, S. - A., “STUDIES OF GENETIC-DIVERGENCE IN THE GENUS LIRIODENDRON (MAGNOLIACEAE)”, AMERICAN JOURNAL OF BOTANY, vol. 73, no. 5. BOTANICAL SOC AMER INC OHIO STATE UNIV-DEPT BOTANY 1735 NEIL AVE, COLUMBUS, OH 43210, pp. 686-687, 1986.

A. J. Porath-Krause, Pairett, A. N., Faggionato, D., and Serb, J. M., “Structure and spatial expression differences among duplicated rhabdomeric opsins indicate functional change in photoreception of the scallop”, INTEGRATIVE AND COMPARATIVE BIOLOGY, vol. 55. OXFORD UNIV PRESS INC JOURNALS DEPT, 2001 EVANS RD, CARY, NC 27513 USA, pp. E144-E144, 2015.

J. F. Wendel, Edwards, M. D., and Stuber, C. W., “SOME GENETIC CONSEQUENCES OF REUNITING 2 RACIALLY DIVERGENT POPULATIONS OF ZEA-MAYS-L”, AMERICAN JOURNAL OF BOTANY, vol. 72, no. 6. BOTANICAL SOC AMER INC OHIO STATE UNIV-DEPT BOTANY 1735 NEIL AVE, COLUMBUS, OH 43210, pp. 879-879, 1985.

M. M. Cerney and Adams, D. C., “Sequestering Size: The Role of Allometry and Gender in Digital Human Modeling”, Proceedings of the SAE Digital Human Modeling Conference. pp. 2004-04DHM-38, 2004.

H. Twyman, Valenzuela, N., Literman, R., Andersson, S., and Mundy, N. I., “Seeing red to being red: conserved genetic mechanism for red cone oil droplets and co-option for red coloration in birds and turtles”, Proc. R. Soc. B, vol. 283, no. 1836. The Royal Society, p. 20161208, 2016.

A. J. Krause, Pairett, A. N., and Serb, J. M., “The role of gene duplication and convergence in the molecular evolution of scallop opsins”, INTEGRATIVE AND COMPARATIVE BIOLOGY, vol. 51. OXFORD UNIV PRESS INC JOURNALS DEPT, 2001 EVANS RD, CARY, NC 27513 USA, pp. E73-E73, 2011.

J. M. Serb and Oakley, T. H., “Reconciled phylogenetic trees as an emerging analytical framework for evolutionary developmental biology”, INTEGRATIVE AND COMPARATIVE BIOLOGY, vol. 44, no. 6. SOC INTEGRATIVE COMPARATIVE BIOLOGY 1313 DOLLEY MADISON BLVD, NO 402, MCLEAN, VA 22101 USA, pp. 639-639, 2004.

J. M. Serb and Puslednik, L., “Phylogenetic relationships of the pectinidae and the evolution of sexual reproductive modes: How important is dispersal life history?”, JOURNAL OF SHELLFISH RESEARCH, vol. 26, no. 4. NATL SHELLFISHERIES ASSOC C/O DR. SANDRA E. SHUMWAY, UNIV CONNECTICUT, 1080 SHENNECOSSETT RD, GROTON, CT 06340 USA, pp. 1344-1345, 2007.

E. C. Fricke, Tewksbury, J. J., Wandrag, E. M., and Rogers, H. S., “Mutualistic strategies minimize coextinction in plant–disperser networks”, Proc. R. Soc. B, vol. 284, no. 1854. The Royal Society, p. 20162302, 2017.

J. F. Wendel, Edwards, M. D., and Stuber, C. W., “MULTILOCUS GENETIC-CONTROL OF PREFERENTIAL FERTILIZATION IN ZEA-MAYS-L”, AMERICAN JOURNAL OF BOTANY, vol. 74, no. 5. BOTANICAL SOC AMER INC OHIO STATE UNIV-DEPT BOTANY 1735 NEIL AVE, COLUMBUS, OH 43210, pp. 671-671, 1987.

D. Ashlock, Adams, D. C., and Doty, D., “Morphometric grayscale texture analysis using foot patterns”, Evolutionary Computation, 2003. CEC'03. The 2003 Congress on, vol. 3. IEEE, pp. 1575-1581, 2003.

J. M. Jandt, Suryanarayanan, S., Hermanson, J. C., Jeanne, R. L., and Toth, A. L., “Maternal and nourishment factors interact to influence offspring developmental trajectories in social wasps”, Proc. R. Soc. B, vol. 284, no. 1857. The Royal Society, p. 20170651, 2017.

E. Sherratt, Adams, D. C., and Serb, J. M., “Macroevolution, phylomorphospace and directional evolution in recessing scallops”, INTEGRATIVE AND COMPARATIVE BIOLOGY, vol. 55. OXFORD UNIV PRESS INC JOURNALS DEPT, 2001 EVANS RD, CARY, NC 27513 USA, pp. E166-E166, 2015.

J. F. Wendel, “Jeans, Genes, and The Independent Domestications Of Cotton”, Plant and Animal Genome XXI Conference. Plant and Animal Genome, 2013.

M. E. Jakubauskas, Debinski, D., and Kindscher, K., “Integration of multispectral and ecological data for characterizing montane meadow communities in the Greater Yellowstone Ecosystem”, Geoscience and Remote Sensing Symposium, 1996. IGARSS'96.'Remote Sensing for a Sustainable Future.', International, vol. 4. IEEE, pp. 2300-2302, 1996.

A. N. Pairett and Serb, J. M., “Identifying the molecular link between photosensitive tissues and the eyes of the bay scallop, Argopecten irradians.”, INTEGRATIVE AND COMPARATIVE BIOLOGY, vol. 54. OXFORD UNIV PRESS INC JOURNALS DEPT, 2001 EVANS RD, CARY, NC 27513 USA, pp. E159-E159, 2014.

M. L. Ainouche and Wendel, J. F., “Genome technologies, polyploidy and evolution”, Ecole thématique CNRS “High-throughput molecular biology methods in the environmental sciences”. 2005.

M. D. Edwards, Stuber, C. W., and Wendel, J. F., “THE GENETIC-BASIS OF QUANTITATIVE TRAITS-EVIDENCE FROM AN EXPERIMENTAL MAIZE POPULATION”, AMERICAN JOURNAL OF BOTANY, vol. 72, no. 6. BOTANICAL SOC AMER INC OHIO STATE UNIV-DEPT BOTANY 1735 NEIL AVE, COLUMBUS, OH 43210, pp. 875-876, 1985.

A. J. Krause and Serb, J. M., “Functional divergence? Comparing opsin expression in extra-ocular tissues and eyes of the scallop (Pectinidae).”, INTEGRATIVE AND COMPARATIVE BIOLOGY, vol. 53. OXFORD UNIV PRESS INC JOURNALS DEPT, 2001 EVANS RD, CARY, NC 27513 USA, pp. E116-E116, 2013.

A. N. Pairett and Serb, J. M., “Comparative transcriptomics: A study using the mirror eye of the scallop, Argopecten irradians”, INTEGRATIVE AND COMPARATIVE BIOLOGY, vol. 51. OXFORD UNIV PRESS INC JOURNALS DEPT, 2001 EVANS RD, CARY, NC 27513 USA, pp. E234-E234, 2011.

A. C. Kraemer, Serb, J. M., and Adams, D. C., “Coevolution of Coloration and Conspicuousness in a Batesian Mimic”, INTEGRATIVE AND COMPARATIVE BIOLOGY, vol. 54. OXFORD UNIV PRESS INC JOURNALS DEPT, 2001 EVANS RD, CARY, NC 27513 USA, pp. E114-E114, 2014.

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