Publications
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“The origin and domestication of cotton”, Cotton: Origin, history, technology, and production. John Wiley & Sons, New York, pp. 3-31, 1999.
, “The origin and evolution of Gossypium”, in Physiology of cotton, Springer Netherlands, 2010, pp. 1-18.
, “The origin of cornbelt maize: the isozyme evidence”, Economic Botany, vol. 42, no. 1, pp. 120-131, 1988.
, “Parallel domestication, convergent evolution and duplicated gene recruitment in allopolyploid cotton”, Genetics, vol. 179, no. 3, pp. 1725-1733, 2008.
, “Parallel expression evolution of oxidative stress-related genes in fiber from wild and domesticated diploid and polyploid cotton (Gossypium)”, Bmc Genomics, vol. 10, no. 1, p. 378, 2009.
, “Parallel up-regulation of the profilin gene family following independent domestication of diploid and allopolyploid cotton (Gossypium)”, Proceedings of the National Academy of Sciences, vol. 108, no. 52, pp. 21152-21157, 2011.
, “Partitioned expression of duplicated genes during development and evolution of a single cell in a polyploid plant”, Proceedings of the National Academy of Sciences, vol. 105, no. 16, pp. 6191-6195, 2008.
, “PCR-mediated recombination in amplification products derived from polyploid cotton”, Theoretical and Applied Genetics, vol. 104, no. 2-3, pp. 482-489, 2002.
, “Persistence of Subgenomes in Paleopolyploid Cotton after 60 My of Evolution”, Molecular biology and evolution, vol. 32, no. 4, pp. 1063-1071, 2015.
, “Phenetic comparison of sevenEchinacea species based on immunomodulatory characteristics”, Economic botany, vol. 60, no. 3, pp. 205-211, 2006.
, “A phylogenetic analysis of indel dynamics in the cotton genus”, Molecular Biology and Evolution, vol. 25, no. 7, pp. 1415-1428, 2008.
, “Phylogenetic determination of the pace of transposable element proliferation in plants: copia and LINE-like elements in Gossypium”, Genome, vol. 51, no. 1, pp. 11-18, 2007.
, “Phylogenetic incongruence: window into genome history and molecular evolution”, in Molecular systematics of plants II, Springer US, 1998, pp. 265-296.
, , “Phylogenetic, morphological, and chemotaxonomic incongruence in the North American endemic genus Echinacea”, American journal of botany, vol. 95, no. 6, pp. 756-765, 2008.
, “Phylogenetic relationships in Gleditsia (Leguminosae) based on ITS sequences”, American journal of botany, vol. 90, no. 2, pp. 310-320, 2003.
, “Phylogenetically distinct cellulose synthase genes support secondary wall thickening in arabidopsis shoot trichomes and cotton fiber”, Journal of integrative plant biology, vol. 52, no. 2, pp. 205-220, 2010.
, “Phylogenetics of the cotton genus (Gossypium): character-state weighted parsimony analysis of chloroplast-DNA restriction site data and its systematic and biogeographic implications”, Systematic Botany, pp. 115-143, 1992.
, “Phylogeny, duplication, and intraspecific variation of Adh sequences in new world diploid cottons (Gossypium L., Malvaceae)”, Molecular Phylogenetics and Evolution, vol. 16, no. 1, pp. 73-84, 2000.
, “A phylogeny of the grass family (Poaceae) based on ndhF sequence data”, Systematic Botany, pp. 436-460, 1995.
, “Phylogeny of the New World diploid cottons (Gossypium L., Malvaceae) based on sequences of three low-copy nuclear genes”, Plant Systematics and Evolution, vol. 252, no. 3-4, pp. 199-214, 2005.
, “Phylogeny of the Vittariaceae: convergent simplification leads to a polyphyletic Vittaria”, American Fern Journal, pp. 283-305, 1995.
, Plant Genome Diversity: Vol. 1: Plant Genomes, Their Residents, and Their Evolutionary Dynamics. Springer, 2012.
, Plant Genome Diversity Volume 2: Physical Structure, Behaviour and Evolution of Plant Genomes, vol. 2. Springer Science & Business Media, 2012.
, “Plant speciation–rise of the poor cousins”, New Phytologist, vol. 161, no. 1, pp. 3-8, 2004.
, “Polyploid formation in cotton is not accompanied by rapid genomic changes”, Genome, vol. 44, no. 3, pp. 321-330, 2001.
, “Polyploid speciation and genome evolution: Lessons from recent allopolyploids”, in Evolutionary Biology: Genome Evolution, Speciation, Coevolution and Origin of Life, Springer International Publishing, 2014, pp. 87-113.
, “Polyploidy and crop improvement”, Crop Science, vol. 46, no. Supplement_1, p. S-3-S-14, 2006.
, “Polyploidy and genome evolution in plants”, Current opinion in plant biology, vol. 8, no. 2, pp. 135-141, 2005.
, “Polyploidy and the evolutionary history of cotton”, Advances in agronomy, vol. 78, pp. 139-186, 2003.
, , “Proteomic profiling of developing cotton fibers from wild and domesticated Gossypium barbadense”, New Phytologist, vol. 200, no. 2, pp. 570-582, 2013.
, “Proteomics profiling of fiber development and domestication in upland cotton (Gossypium hirsutum L.)”, Planta, vol. 240, no. 6, pp. 1237-1251, 2014.
, “Rapid diversification of the cotton genus (Gossypium: Malvaceae) revealed by analysis of sixteen nuclear and chloroplast genes”, American Journal of Botany, vol. 89, no. 4, pp. 707-725, 2002.
, “Rapid DNA loss as a counterbalance to genome expansion through retrotransposon proliferation in plants”, Proceedings of the National Academy of Sciences, vol. 106, no. 42, pp. 17811-17816, 2009.
, “Rapid DNA loss as a counterbalance to retrotransposon proliferation in plant genome size evolution”, Transposable Elements and Genome Size Dynamics in Gossypium, p. 61, 2007.
, “A rapid method for extraction of cotton (Gossypium spp.) genomic DNA suitable for RFLP or PCR analysis”, Plant Molecular Biology Reporter, vol. 11, no. 2, pp. 122-127, 1993.
, “Rate variation among nuclear genes and the age of polyploidy in Gossypium”, Molecular biology and evolution, vol. 20, no. 4, pp. 633-643, 2003.
, “Recent insights into mechanisms of genome size change in plants”, Journal of Botany, vol. 2010, 2010.
, “Reciprocal silencing, transcriptional bias and functional divergence of homeologs in polyploid cotton (Gossypium)”, Genetics, vol. 182, no. 2, pp. 503-517, 2009.
, “Reevaluating the origin of domesticated cotton (Gossypium hirsutum; Malvaceae) using nuclear restriction fragment length polymorphisms (RFLPs)”, American journal of botany, pp. 1309-1326, 1994.
, “Re-evaluating the phylogeny of allopolyploid Gossypium L”, Molecular Phylogenetics and Evolution, 2015.
, “Re-evaluating the phylogeny of allopolyploid Gossypium L.”, Molecular phylogenetics and evolution, vol. 92, pp. 45-52, 2015.
, “Repeated big bangs and the expanding universe: Directionality in plant genome size evolution”, Plant Science, vol. 174, no. 6, pp. 557-562, 2008.
, “Repeated polyploidization of Gossypium genomes and the evolution of spinnable cotton fibres”, Nature, vol. 492, no. 7429, pp. 423-427, 2012.
, “Reproductive and Pollination Biology of the Endemic Hawaiian Cotton, Gossypium tomentosum (Malvaceae) 1”, Pacific Science, vol. 64, no. 1, pp. 45-55, 2010.
, “Responses of the cotton genome to polyploidy”, in Genetics and Genomics of Cotton, Springer US, 2009, pp. 419-429.
, “Restriction fragment length polymorphism in wild and cultivated tetraploid wheat”, Israel Journal of Plant Sciences, vol. 47, no. 4, pp. 213-224, 1999.
, “Retrotransposon activation followed by rapid repression in introgressed rice plants”, Genome, vol. 43, no. 5, pp. 874-880, 2000.
, “Retrotransposon-mediated genome evolution on a local ecological scale”, Proceedings of the National Academy of Sciences, vol. 97, no. 12, pp. 6250-6252, 2000.
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