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Journal Article

D. C. Adams and Collyer, M. L., “On the comparison of the strength of morphological integration across morphometric datasets”, Evolution, 2016.

J. W. Raich, Bowden, R. D., and Steudler, P. A., “Comparison of two static chamber techniques for determining carbon dioxide efflux from forest soils”, Soil Science Society of America Journal, vol. 54, no. 6, pp. 1754-1757, 1990.

B. S. Gaut, Clark, L. G., Wendel, J. F., and Muse, S. V., “Comparisons of the molecular evolutionary process at rbcL and ndhF in the grass family (Poaceae).”, Molecular Biology and Evolution, vol. 14, no. 7, pp. 769-777, 1997.

J. M. Serb and Lydeard, C., “Complete mtDNA sequence of the North American freshwater mussel, Lampsilis ornata (Unionidae): an examination of the evolution and phylogenetic utility of mitochondrial genome organization in Bivalvia (Mollusca)”, Molecular Biology and Evolution, vol. 20, no. 11, pp. 1854-1866, 2003.

J. Deitloff, Petersen, J. D., and Adams, D. C., “Complex species interactions lead to unpredictable outcomes in Plethodon”, Herpetologica, vol. 69, no. 1, pp. 1-10, 2013.

L. Gong, Kakrana, A., Arikit, S., Meyers, B. C., and Wendel, J. F., “Composition and expression of conserved microRNA genes in diploid cotton (Gossypium) species”, Genome biology and evolution, vol. 5, no. 12, pp. 2449-2459, 2013.

S. Kumar Mishra, Muthye, V., and Kandoi, G., “Computational Methods for Predicting Functions at The mRNA Isoform Level”, 2020.

J. M. Serb and M Barnhart, C., “Congruence and Conflict Between Molecular and Reproductive Characters When Assessing Biological Diversity in the Western Fanshell Cyprogenia aberti (Bivalvia, Unionidae) 1”, Annals of the Missouri Botanical Garden, vol. 95, no. 2, pp. 248-261, 2008.

T. Seelanan, Schnabel, A., and Wendel, J. F., “Congruence and consensus in the cotton tribe (Malvaceae)”, Systematic Botany, pp. 259-290, 1997.

D. Allen McGranahan, Daigh, A. L., Veenstra, J. J., Engle, D. M., Miller, J. R., and Debinski, D. M., “Connecting Soil Organic Carbon and Root Biomass with Land-Use and Vegetation in Temperate Grassland”, The Scientific World Journal, vol. 2014, 2014.

F. Jeltsch, Moloney, K. A., Schwager, M., Körner, K., and Blaum, N., “Consequences of correlations between habitat modifications and negative impact of climate change for regional species survival”, Agriculture, ecosystems & environment, vol. 145, no. 1, pp. 49-58, 2011.

J. L. Hamrick and Nason, J. D., “Consequences of dispersal in plants”, Population dynamics in ecological space and time, vol. 1, p. 203, 1996.

J. P. Gallagher, Grover, C. E., Hu, G., Jareczek, J. J., and Wendel, J. F., “Conservation and Divergence in Duplicated Fiber Coexpression Networks Accompanying Domestication of the Polyploid Gossypium hirsutum L.”, G3: Genes, Genomes, Genetics, 2020.

D. M. Debinski and Cross, M. S., “Conservation and Global Climate Change”, 2008.

J. E. Buhay, Serb, J. M., C Dean, R. E. N. É. E., Parham, Q. S. H. E. Q. U. I. L. L. A., and Lydeard, C., “Conservation genetics of two endangered unionid bivalve species, Epioblasma florentina walkeri and E. capsaeformis (Unionidae: Lampsilini)”, Journal of Molluscan Studies, vol. 68, no. 4, pp. 385-392, 2002.

L. Ries, Debinski, D. M., and Wieland, M. L., “Conservation value of roadside prairie restoration to butterfly communities”, Conservation Biology, vol. 15, no. 2, pp. 401-411, 2001.

S. M. Rehan, Glastad, K. M., Steffen, M. A., Fay, C. R., Hunt, B. G., and Toth, A. L., “Conserved genes underlie phenotypic plasticity in an incipiently social bee”, Genome Biology and Evolution, 2018.

J. W. Leff, Jones, S. E., Prober, S. M., Barberán, A., Borer, E. T., Firn, J. L., W Harpole, S., Hobbie, S. E., Hofmockel, K. S., and Knops, J. M. H., “Consistent responses of soil microbial communities to elevated nutrient inputs in grasslands across the globe”, Proceedings of the National Academy of Sciences, p. 201508382, 2015.

E. W. Seabloom, Moloney, K. A., and van der Valk, A. G., “Constraints on the establishment of plants along a fluctuating water-depth gradient”, Ecology, vol. 82, no. 8, pp. 2216-2232, 2001.

J. Derek Scasta, Duchardt, C., Engle, D. M., Miller, J. R., Debinski, D. M., and Harr, R. N., “Constraints to restoring fire and grazing ecological processes to optimize grassland vegetation structural diversity”, Ecological Engineering, vol. 95, pp. 865-875, 2016.

D. J. Crawford, Doyle, J. J., Soltis, D. E., Soltis, P. S., and Wendel, J. F., “Contemporary and future studies in plant speciation”, 2014.

D. J. Crawford, Doyle, J. J., Soltis, D. E., Soltis, P. S., and Wendel, J. F., “Contemporary and future studies in plant speciation, morphological/floral evolution and polyploidy: honouring the scientific contributions of Leslie D. Gottlieb to plant evolutionary biology”, Philosophical Transactions of the Royal Society B: Biological Sciences, vol. 369, no. 1648, p. 20130341, 2014.

A. Marie Gawel, Rogers, H. S., Miller, R. H., and Kerr, A. M., “Contrasting ecological roles of non-native ungulates in a novel ecosystem”, Royal Society Open Science, vol. 5, no. 4, p. 170151, 2018.

C. N. Passow, Bronikowski, A. M., Blackmon, H., Parsai, S., Schwartz, T. S., and McGaugh, S. E., “Contrasting patterns of rapid molecular evolution within the p53 network across mammal and sauropsid lineages”, Genome Biology and Evolution, 2019.

C. - M. Shan, Shangguan, X. - X., Zhao, B., Zhang, X. - F., Chao, L. -men, Yang, C. - Q., Wang, L. - J., Zhu, H. - Y., Da Zeng, Y. -, and Guo, W. - Z., “Control of cotton fibre elongation by a homeodomain transcription factor GhHOX3”, Nature communications, vol. 5, 2014.

L. G. Clark, Londoño, X., Tyrrell, C. D., and Judziewicz, E. J., “Convergence strikes again in the Neotropical woody bamboos (Poaceae: Bambusoideae: Bambuseae): a new Andean genus and a new species”, Botanical Journal of the Linnean Society, 2019.

A. Alejandrino, Puslednik, L., and Serb, J. M., “Convergent and parallel evolution in life habit of the scallops (Bivalvia: Pectinidae)”, BMC Evolutionary Biology, vol. 11, no. 1, p. 164, 2011.

L. E. Flagel, Chen, L., Chaudhary, B., and Wendel, J. F., “Coordinated and fine-scale control of homoeologous gene expression in allotetraploid cotton”, Journal of heredity, p. esp003, 2009.

P. L. VanderWiel, Voytas, D. F., and Wendel, J. F., “Copia-like retrotransposable element evolution in diploid and polyploid cotton (Gossypium L.)”, Journal of molecular evolution, vol. 36, no. 5, pp. 429-447, 1993.

R. L. Small and Wendel, J. F., “Copy number lability and evolutionary dynamics of the Adh gene family in diploid and tetraploid cotton (Gossypium)”, Genetics, vol. 155, no. 4, pp. 1913-1926, 2000.

D. Allen McGranahan, Engle, D. M., Harr, R. N., Miller, J. R., and Debinski, D. M., “COS 73-5: The ecological oddity of an invasive Eurasian grass that lengthens fire-return interval”, The 93rd ESA Annual Meeting, 2008.

B. Bond‐Lamberty, Christianson, D. S., Malhotra, A., Pennington, S. C., Sihi, D., AghaKouchak, A., Anjileli, H., M Arain, A., Armesto, J. J., and Ashraf, S., “COSORE: A community database for continuous soil respiration and other soil‐atmosphere greenhouse gas flux data”, Global change biology, 2020.

S. Hyberg, Iovanna, R., Crumpton, W., and Richmond, S., “The cost effectiveness of wetlands designed and sited for nitrate removal: The effect of increased efficiency, rising easement costs, and lower interest rates”, Journal of Soil and Water Conservation, vol. 70, no. 2, 2015.

M. B. Hufford, Mier y Teran, J. C. Berny, and Gepts, P., “Crop Biodiversity: An Unfinished Magnum Opus of Nature”, Annual Review of Plant Biology, vol. 70, pp. 727-751, 2019.

G. M. Janzen and Hufford, M. B., “Crop Domestication: A Sneak-Peek into the Midpoint of Maize Evolution”, Current Biology, vol. 26, no. 23, pp. R1240-R1242, 2016.

K. M. Olsen and Wendel, J. F., “Crop plants as models for understanding plant adaptation and diversification”, Frontiers in plant science, vol. 4, 2013.

V. D. Picasso, E Brummer, C., Liebman, M., Dixon, P. M., and Wilsey, B. J., “Crop species diversity affects productivity and weed suppression in perennial polycultures under two management strategies”, Crop Science, vol. 48, no. 1, pp. 331-342, 2008.

D. M. Debinski, Moranz, R. A., Delaney, J. T., Miller, J. R., Engle, D. M., Winkler, L. B., McGranahan, D. A., Barney, R. J., Trager, J. C., and Stephenson, A. L., “A cross-taxonomic comparison of insect responses to grassland management and land-use legacies”, Ecosphere, vol. 2, no. 12, p. art131, 2011.

I. Álvarez and Wendel, J. F., “Cryptic interspecific introgression and genetic differentiation within Gossypium aridum (Malvaceae) and its relatives”, Evolution, vol. 60, no. 3, pp. 505-517, 2006.

R. Cronn, Small, R. L., Haselkorn, T., and Wendel, J. F., “Cryptic repeated genomic recombination during speciation in Gossypium gossypioides”, Evolution, vol. 57, no. 11, pp. 2475-2489, 2003.

M. L. Silveira de Carvalho, de Jesus, I. S. D., da Silva, R. M., Leite, K. R. B., Schnadelbach, A. S., Clark, L. G., and R De Oliveira, P., “Cryptic speciation in the herbaceous bamboo genus Piresia (Poaceae, Olyreae)”, Botanical Journal of the Linnean Society, 2019.

R. Cronn and Wendel, J. F., “Cryptic trysts, genomic mergers, and plant speciation”, New Phytologist, vol. 161, no. 1, pp. 133-142, 2004.

J. F. Wendel and Parks, C. R., “Cultivar characterization and nomenclatural clarification by protein electrophoresis in Camellia japonica L”, American Camellia Yearbook (USA), 1982.

J. F. Wendel and Parks, C. R., “Cultivar identification in Camellia japonica L. using allozyme polymorphisms.”, Journal American Society for Horticultural Science, 1983.

M. Sieck, Ibisch, P. L., Moloney, K. A., and Jeltsch, F., “Current models broadly neglect specific needs of biodiversity conservation in protected areas under climate change”, BMC ecology, vol. 11, no. 1, p. 12, 2011.

E. E. Montiel, Badenhorst, D., Lee, L. S., Literman, R., Trifonov, V., and Valenzuela, N., “Cytogenetic Insights into the Evolution of Chromosomes and Sex Determination Reveal Striking Homology of Turtle Sex Chromosomes to Amphibian Autosomes”, Cytogenetic and Genome Research, 2016.

C. Li, Sun, X., Conover, J. L., Zhang, Z., Wang, J., Wang, X., Deng, X., Wang, H., Liu, B., and Wendel, J. F., “Cytonuclear coevolution following homoploid hybrid speciation in Aegilops tauschii”, Molecular Biology and Evolution, 2018.

L. Gong, Salmon, A., Yoo, M. - J., Grupp, K. K., Wang, Z., Paterson, A. H., and Wendel, J. F., “The cytonuclear dimension of allopolyploid evolution: an example from cotton using rubisco”, Molecular biology and evolution, vol. 29, no. 10, pp. 3023-3036, 2012.

L. Gong, Olson, M., and Wendel, J. F., “Cytonuclear evolution of rubisco in four allopolyploid lineages”, Molecular biology and evolution, vol. 31, no. 10, pp. 2624-2636, 2014.

J. I. Davis, Simmons, M. P., Stevenson, D. W., and Wendel, J. F., “Data decisiveness, data quality, and incongruence in phylogenetic analysis: an example from the monocotyledons using mitochondrial atp A sequences”, Systematic Biology, vol. 47, no. 2, pp. 282-310, 1998.

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