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Journal Article
A. Kaliontzopoulou, Adams, D. C., van der Meijden, A., Perera, A., and Carretero, M. A., “Relationships between head morphology, bite performance and ecology in two species of Podarcis wall lizards”, Evolutionary Ecology, vol. 26, no. 4, pp. 825-845, 2012.
B. J. Wilsey, Chalcraft, D. R., Bowles, C. M., and Willig, M. R., “Relationships among indices suggest that richness is an incomplete surrogate for grassland biodiversity”, Ecology, vol. 86, no. 5, pp. 1178-1184, 2005.
L. Kelly and Debinski, D. M., “Relationship of host plant density to size and abundance of the regal fritillary Speyeria idalia drury(Nymphalidae)”, Journal of the Lepidopterists Society, vol. 52, no. 3, pp. 262-276, 1998.
D. R. Chalcraft, Wilsey, B. J., Bowles, C., and Willig, M. R., “The relationship between productivity and multiple aspects of biodiversity in six grassland communities”, Biodiversity and conservation, vol. 18, no. 1, pp. 91-104, 2009.
I. A. Mendelssohn, Flynn, K. M., and Wilsey, B. J., “The relationship between produced water discharges, and plant biomass and species composition, in three Louisiana marshes”, Oil and Chemical Pollution, vol. 7, no. 4, pp. 317-335, 1990.
S. Shepherd and Debinski, D. M., “Reintroduction of Regal Fritillary (Speyeria idalia)”, Ecological Restoration, vol. 23, no. 4, 2005.
P. C. Klahs, Gallaher, T. J., and Clark, L. G., “A refined method for digitally modeling small and complex plant structures in 3D: An example from the grasses (Poaceae)”, Applications in Plant Sciences, vol. 6, no. 8, p. e01177, 2018.
C. E. Grover, Gallagher, J. P., Jareczek, J. J., Page, J. T., Udall, J. A., Gore, M. A., and Wendel, J. F., “Re-evaluating the phylogeny of allopolyploid Gossypium L.”, Molecular phylogenetics and evolution, vol. 92, pp. 45-52, 2015.
C. E. Grover, Gallagher, J. P., Jareczek, J. J., Page, J. T., Udall, J. A., Gore, M. A., and Wendel, J. F., “Re-evaluating the phylogeny of allopolyploid Gossypium L”, Molecular Phylogenetics and Evolution, 2015.
C. L. Brubaker and Wendel, J. F., “Reevaluating the origin of domesticated cotton (Gossypium hirsutum; Malvaceae) using nuclear restriction fragment length polymorphisms (RFLPs)”, American journal of botany, pp. 1309-1326, 1994.
B. J. Wilsey and H Polley, W., “Reductions in grassland species evenness increase dicot seedling invasion and spittle bug infestation”, Ecology Letters, vol. 5, no. 5, pp. 676-684, 2002.
L. G. Clark and MASON, J. E. S. S. I. C. A. J., “Redescription of Chusquea perligulata (Poaceae: Bambusoideae: Bambuseae: Chusqueinae) and description of a similar but new species of Chusquea from Ecuador”, Phytotaxa, vol. 400, no. 4, pp. 227-236, 2019.
C. Ye, Chen, D., Hall, S. J., Pan, S., Yan, X., Bai, T., Guo, H., Zhang, Y., Bai, Y., and Hu, S., “Reconciling multiple impacts of nitrogen enrichment on soil carbon: plant, microbial and geochemical controls”, Ecology letters, 2018.
B. Chaudhary, Flagel, L., Stupar, R. M., Udall, J. A., Verma, N., Springer, N. M., and Wendel, J. F., “Reciprocal silencing, transcriptional bias and functional divergence of homeologs in polyploid cotton (Gossypium)”, Genetics, vol. 182, no. 2, pp. 503-517, 2009.
C. E. Grover and Wendel, J. F., “Recent insights into mechanisms of genome size change in plants”, Journal of Botany, vol. 2010, 2010.
B. J. Wilsey and H Polley, W., “Realistically low species evenness does not alter grassland species-richness-productivity relationships”, Ecology, vol. 85, no. 10, pp. 2693-2700, 2004.
D. L. Rabosky and Adams, D. C., “Rates of morphological evolution are correlated with species richness in salamanders”, Evolution, vol. 66, no. 6, pp. 1807-1818, 2012.
A. M. Sparkman, Schwartz, T. S., Madden, J. A., Boyken, S. E., Ford, N. B., Serb, J. M., and Bronikowski, A. M., “Rates of molecular evolution vary in vertebrates for insulin-like growth factor-1 (IGF-1), a pleiotropic locus that regulates life history traits”, General and comparative endocrinology, vol. 178, no. 1, pp. 164-173, 2012.
D. S. Senchina, Álvarez, I., Cronn, R. C., Liu, B., Rong, J., Noyes, R. D., Paterson, A. H., Wing, R. A., Wilkins, T. A., and Wendel, J. F., “Rate variation among nuclear genes and the age of polyploidy in Gossypium”, Molecular biology and evolution, vol. 20, no. 4, pp. 633-643, 2003.
A. E. Russell and Raich, J. W., “Rapidly growing tropical trees mobilize remarkable amounts of nitrogen, in ways that differ surprisingly among species”, Proceedings of the National Academy of Sciences, vol. 109, no. 26, pp. 10398-10402, 2012.
J. Han, Masonbrink, R. E., Shan, W., Song, F., Zhang, J., Yu, W., Wang, K., Wu, Y., Tang, H., and Wendel, J. F., “Rapid proliferationand nucleolar organizer targeting centromeric retrotransposonsin cotton”, The Plant Journal, 2016.
S. E. McGaugh, Bronikowski, A. M., Kuo, C. - H., Reding, D. M., Addis, E. A., Flagel, L. E., Janzen, F. J., and Schwartz, T. S., “Rapid molecular evolution across amniotes of the IIS/TOR network”, Proceedings of the National Academy of Sciences, p. 201419659, 2015.
A. H. Paterson, Brubaker, C. L., and Wendel, J. F., “A rapid method for extraction of cotton (Gossypium spp.) genomic DNA suitable for RFLP or PCR analysis”, Plant Molecular Biology Reporter, vol. 11, no. 2, pp. 122-127, 1993.
M. Tang, Chen, Z., Grover, C. E., Wang, Y., Li, S., Liu, G., Ma, Z., Wendel, J. F., and Hua, J., “Rapid evolutionary divergence of Gossypium barbadense and G. hirsutum mitochondrial genomes”, BMC Genomics, vol. 16, no. 1, p. 770, 2015.
J. S. Hawkins, Rapp, R. A., and Wendel, J. F., “Rapid DNA loss as a counterbalance to retrotransposon proliferation in plant genome size evolution”, Transposable Elements and Genome Size Dynamics in Gossypium, p. 61, 2007.
J. S. Hawkins, Proulx, S. R., Rapp, R. A., and Wendel, J. F., “Rapid DNA loss as a counterbalance to genome expansion through retrotransposon proliferation in plants”, Proceedings of the National Academy of Sciences, vol. 106, no. 42, pp. 17811-17816, 2009.
R. C. Cronn, Small, R. L., Haselkorn, T., and Wendel, J. F., “Rapid diversification of the cotton genus (Gossypium: Malvaceae) revealed by analysis of sixteen nuclear and chloroplast genes”, American Journal of Botany, vol. 89, no. 4, pp. 707-725, 2002.
F. I. Isbell and Wilsey, B. J., “Rapid biodiversity declines in both ungrazed and intensely grazed exotic grasslands”, Plant Ecology, vol. 212, no. 10, pp. 1663-1674, 2011.
E. M. Myers, Janzen, F. J., Adams, D. C., and Tucker, J. K., “Quantitative genetics of plastron shape in slider turtles (Trachemys scripta)”, Evolution, vol. 60, no. 3, pp. 563-572, 2006.
D. C. Adams, “Quantitative genetics and evolution of head shape in Plethodon salamanders”, Evolutionary Biology, vol. 38, no. 3, pp. 278-286, 2011.
L. C. Jesse, Nason, J. D., Obrycki, J. J., and Moloney, K. A., “Quantifying the levels of sexual reproduction and clonal spread in the invasive plant, Rosa multiflora”, Biological invasions, vol. 12, no. 6, pp. 1847-1854, 2010.
T. S. Mitchell, Janzen, F. J., and Warner, D. A., “Quantifying the effects of embryonic phenotypic plasticity on adult phenotypes in reptiles: A review of current knowledge and major gaps”, Journal of Experimental Zoology Part A: Ecological and Integrative Physiology, 2018.
D. M. Debinski, VanNimwegen, R. E., and Jakubauskas, M. E., “Quantifying relationships between bird and butterfly community shifts and environmental change”, Ecological Applications, vol. 16, no. 1, pp. 380-393, 2006.
M. E. Dornbush, Isenhart, T. M., and Raich, J. W., “Quantifying fine-root decomposition: an alternative to buried litterbags”, Ecology, vol. 83, no. 11, pp. 2985-2990, 2002.
D. Debinski, “Quantifying Early Indicators of Global Climate Change”, University of Wyoming National Park Service Research Center Annual Report, vol. 30, no. 1, pp. 97-99, 2006.
D. C. Adams and Cerney, M. M., “Quantifying biomechanical motion using Procrustes motion analysis”, Journal of biomechanics, vol. 40, no. 2, pp. 437-444, 2007.
D. C. Adams, “Quantifying and comparing phylogenetic evolutionary rates for shape and other high-dimensional phenotypic data”, Systematic biology, p. syt105, 2013.
R. Literman, Burrett, A., Bista, B., and Valenzuela, N., “Putative Independent Evolutionary Reversals from Genotypic to Temperature-Dependent Sex Determination are Associated with Accelerated Evolution of Sex-Determining Genes in Turtles”, Journal of Molecular Evolution, pp. 1-16, 2017.
G. Hu, Koh, J., Yoo, M. - J., Pathak, D., Chen, S., and Wendel, J. F., “Proteomics profiling of fiber development and domestication in upland cotton (Gossypium hirsutum L.)”, Planta, vol. 240, no. 6, pp. 1237-1251, 2014.
G. Hu, Koh, J., Yoo, M. ‐J., Grupp, K., Chen, S., and Wendel, J. F., “Proteomic profiling of developing cotton fibers from wild and domesticated Gossypium barbadense”, New Phytologist, vol. 200, no. 2, pp. 570-582, 2013.
B. J. Wilsey, “Productivity and subordinate species response to dominant grass species and seed source during restoration”, Restoration Ecology, vol. 18, no. 5, pp. 628-637, 2010.
J. W. Raich, Russell, A. E., and Vitousek, P. M., “Primary productivity and ecosystem development along an elevational gradient on Mauna Loa, Hawai'i”, Ecology, vol. 78, no. 3, pp. 707-721, 1997.
B. E. L. É. N. FADRIQUE, PIANISSOLA, E. V. A. N. D. R. O. M. A. C. H. A. D. O., FEELEY, K. E. N. N. E. T. H. J., and Clark, L. G., “A preliminary revision of Chusquea sect. Swallenochloa (Bambuseae, Bambusoideae, Poaceae) in Peru including the description of two new species and the resurrection of two other species”, Phytotaxa, vol. 418, no. 2, pp. 171-194, 2019.
J. W. Raich and Turner, I. M., “A preliminary list of the tree, shrub, palm and pandan species of the Pantai Acheh Forest Reserve, Penang”, Malayan Nat, vol. 43, no. 3, pp. 23-28, 1990.
E. L. Mudrak, Schafer, J. L., Fuentes-Ramirez, A., Holzapfel, C., and Moloney, K. A., “Predictive modeling of spatial patterns of soil nutrients related to fertility islands”, Landscape ecology, vol. 29, no. 3, pp. 491-505, 2014.
B. J. Wilsey, Martin, L. M., and H Polley, W., “Predicting Plant Extinction Based on Species‐Area Curves in Prairie Fragments with High Beta Richness”, Conservation Biology, vol. 19, no. 6, pp. 1835-1841, 2005.
C. Mazancourt, Isbell, F., Larocque, A., Berendse, F., Luca, E., Grace, J. B., Haegeman, B., H Polley, W., Roscher, C., and Schmid, B., “Predicting ecosystem stability from community composition and biodiversity”, Ecology Letters, vol. 16, no. 5, pp. 617-625, 2013.
A. C. Kraemer and Adams, D. C., “Predator perception of Batesian mimicry and conspicuousness in a salamander”, Evolution, vol. 68, no. 4, pp. 1197-1206, 2014.
T. Patrick Lyons, Miller, J. R., Debinski, D. M., and Engle, D. M., “Predator identity influences the effect of habitat management on nest predation”, Ecological Applications, 2015.
E. K. Moody and Lozano‐Vilano, Mde Lourdes, “Predation drives morphological convergence in the Gambusia panuco species group among lotic and lentic habitats”, Journal of evolutionary biology, 2017.

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