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2015

A. H. Paterson and Wendel, J. F., “Unraveling the fabric of polyploidy”, Nature Biotechnology, vol. 33, no. 5, pp. 491-493, 2015.

A. H. Paterson and Wendel, J. F., “Unraveling the fabric of polyploidy”, Nature biotechnology, vol. 33, no. 5, pp. 491-493, 2015.

K. J. Egan, Sr, J. A. Herriges, Kling, C. L., and Downing, J. A., “Valuing Water Quality in Midwestern Lake Ecosystems”, Iowa Ag Review, vol. 10, no. 3, p. 2, 2015.

J. W. Veldman, Overbeck, G. E., Negreiros, D., Mahy, G., Le Stradic, S., G Fernandes, W., Durigan, G., Buisson, E., Putz, F. E., and Bond, W. J., “Where Tree Planting and Forest Expansion are Bad for Biodiversity and Ecosystem Services”, BioScience, vol. 65, pp. 1011-1018, 2015.

A. M. Wright, Lyons, K. M., Brandley, M. C., and Hillis, D. M., “Which came first: The lizard or the egg? Robustness in phylogenetic reconstruction of ancestral states”, Journal of Experimental Zoology Part B: Molecular and Developmental Evolution, vol. 324, no. 6, pp. 504-516, 2015.

J. F. Wendel, “The wondrous cycles of polyploidy in plants.”, American journal of botany, 2015.

M. W. Pennell, Kirkpatrick, M., Otto, S. P., Vamosi, J. C., Peichel, C. L., Valenzuela, N., and Kitano, J., “Y Fuse? Sex Chromosome Fusions in Fishes and Reptiles”, 2015.

2014

J. W. Raich, Clark, D. A., Schwendenmann, L., and Wood, T. E., “Aboveground tree growth varies with belowground carbon allocation in a tropical rainforest environment”, 2014.

S. Renny-Byfield, Gallagher, J. P., Grover, C. E., Szadkowski, E., Page, J. T., Udall, J. A., Wang, X., Paterson, A. H., and Wendel, J. F., “Ancient gene duplicates in Gossypium (Cotton) exhibit near-complete expression divergence”, Genome biology and evolution, vol. 6, no. 3, pp. 559-571, 2014.

P. G. HARNIK, Serb, J. M., Adams, D. C., RIEMANN, R., and SMITH, T., “ARE CHANGING ENVIRONMENTS REFLECTED IN THE MORPHOLOGICAL DISPARITY OF FOSSIL AND RECENT SCALLOPS FROM THE TROPICAL AMERICAS?”, 2014 GSA Annual Meeting in Vancouver, British Columbia, 2014.

D. C. Adams and Felice, R. N., “Assessing trait covariation and morphological integration on phylogenies using evolutionary covariance matrices”, PloS one, vol. 9, no. 4, p. e94335, 2014.

L. M. Martin, H Polley, W., Daneshgar, P. P., Harris, M. A., and Wilsey, B. J., “Biodiversity, photosynthetic mode, and ecosystem services differ between native and novel ecosystems”, Oecologia, vol. 175, no. 2, pp. 687-697, 2014.

R. E. Masonbrink, Gallagher, J. P., Jareczek, J. J., Renny-Byfield, S., Grover, C. E., Gong, L., and Wendel, J. F., “CenH3 evolution in diploids and polyploids of three angiosperm genera”, BMC plant biology, vol. 14, no. 1, p. 383, 2014.

A. C. Kraemer, Serb, J. M., and Adams, D. C., “Coevolution of Coloration and Conspicuousness in a Batesian Mimic”, INTEGRATIVE AND COMPARATIVE BIOLOGY, vol. 54. OXFORD UNIV PRESS INC JOURNALS DEPT, 2001 EVANS RD, CARY, NC 27513 USA, pp. E114-E114, 2014.

M. - J. Yoo and Wendel, J. F., “Comparative evolutionary and developmental dynamics of the cotton (Gossypium hirsutum) fiber transcriptome”, 2014.

D. Allen McGranahan, Daigh, A. L., Veenstra, J. J., Engle, D. M., Miller, J. R., and Debinski, D. M., “Connecting Soil Organic Carbon and Root Biomass with Land-Use and Vegetation in Temperate Grassland”, The Scientific World Journal, vol. 2014, 2014.

D. J. Crawford, Doyle, J. J., Soltis, D. E., Soltis, P. S., and Wendel, J. F., “Contemporary and future studies in plant speciation”, 2014.

D. J. Crawford, Doyle, J. J., Soltis, D. E., Soltis, P. S., and Wendel, J. F., “Contemporary and future studies in plant speciation, morphological/floral evolution and polyploidy: honouring the scientific contributions of Leslie D. Gottlieb to plant evolutionary biology”, Philosophical Transactions of the Royal Society B: Biological Sciences, vol. 369, no. 1648, p. 20130341, 2014.

C. - M. Shan, Shangguan, X. - X., Zhao, B., Zhang, X. - F., Chao, L. -men, Yang, C. - Q., Wang, L. - J., Zhu, H. - Y., Da Zeng, Y. -, and Guo, W. - Z., “Control of cotton fibre elongation by a homeodomain transcription factor GhHOX3”, Nature communications, vol. 5, 2014.

L. Gong, Olson, M., and Wendel, J. F., “Cytonuclear evolution of rubisco in four allopolyploid lineages”, Molecular biology and evolution, vol. 31, no. 10, pp. 2624-2636, 2014.

S. Renny-Byfield and Wendel, J. F., “Doubling down on genomes: polyploidy and crop plants”, American journal of botany, vol. 101, no. 10, pp. 1711-1725, 2014.

O. Panaud, Jackson, S. A., and Wendel, J. F., “Drivers and dynamics of diversity in plant genomes”, New Phytologist, vol. 202, no. 1, pp. 15-18, 2014.

H. Zhang, Zhu, B., Qi, B., Gou, X., Dong, Y., Xu, C., Zhang, B., Huang, W., Liu, C., and Wang, X., “Evolution of the BBAA component of bread wheat during its history at the allohexaploid level”, The Plant Cell, vol. 26, no. 7, pp. 2761-2776, 2014.

J. Derek Scasta, Engle, D. M., Harr, R. N., and Debinski, D. M., “Fire induced reproductive mechanisms of a Symphoricarpos (Caprifoliaceae) shrub after dormant season burning”, Botanical Studies, vol. 55, no. 1, p. 80, 2014.

D. C. Adams, “A generalized K statistic for estimating phylogenetic signal from shape and other high-dimensional multivariate data”, Systematic biology, vol. 63, no. 5, pp. 685-697, 2014.

M. Yoon Chung, Nason, J. D., Lopez-Pujol, J., Yamashiro, T., Yang, B. - Y., Luo, Y. - B., and Chung, M. Gi, “Genetic consequences of fragmentation on populations of the terrestrial orchid Cymbidium goeringii”, Biological Conservation, vol. 170, pp. 222-231, 2014.

C. Xu, Bai, Y., Lin, X., Zhao, N., Hu, L., Gong, Z., Wendel, J. F., and Liu, B., “Genome-wide disruption of gene expression in allopolyploids but not hybrids of rice subspecies”, Molecular biology and evolution, vol. 31, no. 5, pp. 1066-1076, 2014.

A. N. Pairett and Serb, J. M., “Identifying the molecular link between photosensitive tissues and the eyes of the bay scallop, Argopecten irradians.”, INTEGRATIVE AND COMPARATIVE BIOLOGY, vol. 54. OXFORD UNIV PRESS INC JOURNALS DEPT, 2001 EVANS RD, CARY, NC 27513 USA, pp. E159-E159, 2014.

W. H Polley, Derner, J. D., Jackson, R. B., Wilsey, B. J., and Fay, P. A., “Impacts of climate change drivers on C4 grassland productivity: scaling driver effects through the plant community”, Journal of experimental botany, p. eru009, 2014.

B. J. Wilsey, Daneshgar, P. P., Hofmockel, K., and H Polley, W., “Invaded grassland communities have altered stability‐maintenance mechanisms but equal stability compared to native communities”, Ecology letters, vol. 17, no. 1, pp. 92-100, 2014.

R. N. Harr, Morton, L. Wright, Rusk, S. R., Engle, D. M., Miller, J. R., and Debinski, D., “Landowners' perceptions of risk in grassland management: woody plant encroachment and prescribed fire”, Ecology and Society, vol. 19, no. 2, p. 41, 2014.

J. E. Coate, Buggs, R. J. A., Wendel, J. F., Doyle, J. J., Soltis, D. E., and Soltis, P. S., “The legacy of diploid progenitors in allopolyploid gene”, 2014.

R. J. A. Buggs, Wendel, J. F., Doyle, J. J., Soltis, D. E., Soltis, P. S., and Coate, J. E., “The legacy of diploid progenitors in allopolyploid gene expression patterns”, Philosophical Transactions of the Royal Society B: Biological Sciences, vol. 369, no. 1648, p. 20130354, 2014.

M. A. Condon, Scheffer, S. J., Lewis, M. L., Wharton, R., Adams, D. C., and Forbes, A. A., “Lethal interactions between parasites and prey increase niche diversity in a tropical community”, Science, vol. 343, no. 6176, pp. 1240-1244, 2014.

M. L. Collyer, Sekora, D. J., and Adams, D. C., “A method for analysis of phenotypic change for phenotypes described by high-dimensional data”, Heredity, 2014.

D. C. Adams, “A METHOD FOR ASSESSING PHYLOGENETIC LEAST SQUARES MODELS FOR SHAPE AND OTHER HIGH‐DIMENSIONAL MULTIVARIATE DATA”, Evolution, vol. 68, no. 9, pp. 2675-2688, 2014.

C. E. Grover, Zhu, X., Grupp, K. K., Jareczek, J. J., Gallagher, J. P., Szadkowski, E., Seijo, J. G., and Wendel, J. F., “Molecular confirmation of species status for the allopolyploid cotton species, Gossypium ekmanianum Wittmack”, Genetic Resources and Crop Evolution, vol. 62, no. 1, pp. 103-114, 2014.

G. Mynhardt, Alejandrino, A., Puslednik, L., Corrales, J., and Serb, J. M., “Molluscan Studies”, Journal of Molluscan Studies, vol. 80, pp. 400-411, 2014.

L. M. Martin and Wilsey, B. J., “Native-species seed additions do not shift restored prairie plant communities from exotic to native states”, Basic and Applied Ecology, vol. 15, no. 4, pp. 297-304, 2014.

M. L. Ainouche and Wendel, J. F., “Polyploid speciation and genome evolution: Lessons from recent allopolyploids”, in Evolutionary Biology: Genome Evolution, Speciation, Coevolution and Origin of Life, Springer International Publishing, 2014, pp. 87-113.

A. C. Kraemer and Adams, D. C., “Predator perception of Batesian mimicry and conspicuousness in a salamander”, Evolution, vol. 68, no. 4, pp. 1197-1206, 2014.

E. L. Mudrak, Schafer, J. L., Fuentes-Ramirez, A., Holzapfel, C., and Moloney, K. A., “Predictive modeling of spatial patterns of soil nutrients related to fertility islands”, Landscape ecology, vol. 29, no. 3, pp. 491-505, 2014.

G. Hu, Koh, J., Yoo, M. - J., Pathak, D., Chen, S., and Wendel, J. F., “Proteomics profiling of fiber development and domestication in upland cotton (Gossypium hirsutum L.)”, Planta, vol. 240, no. 6, pp. 1237-1251, 2014.

G. Rivera, Davis, J. N., Godwin, J. C., and Adams, D. C., “Repeatability of Habitat-Associated Divergence in Shell Shape of Turtles”, Evolutionary Biology, vol. 41, pp. 29-37, 2014.

B. A Duthie, Abbott, K. C., and Nason, J. D., “Trade-offs and coexistence: a lottery model applied to fig wasp communities”, The American Naturalist, vol. 183, no. 6, pp. 826-841, 2014.

B. A Duthie, Abbott, K. C., and Nason, J. D., “Trade-Offs and Coexistence: A Lottery Model Applied to Fig Wasp Communities”, The American Naturalist, vol. 183, no. 6, pp. 826-841, 2014.

J. M. Serb, Krause-Porath, A. J., and Pairett, A. N., “Uncovering patterns underlying the molecular evolution of non-visual photoreception in molluscs”, INTEGRATIVE AND COMPARATIVE BIOLOGY, vol. 54. OXFORD UNIV PRESS INC JOURNALS DEPT, 2001 EVANS RD, CARY, NC 27513 USA, pp. E189-E189, 2014.

D. I. Speiser, M Pankey, S., Zaharoff, A. K., Battelle, B. A., Bracken-Grissom, H. D., Breinholt, J. W., Bybee, S. M., Cronin, T. W., Garm, A., and Lindgren, A. R., “Using phylogenetically-informed annotation (PIA) to search for light-interacting genes in transcriptomes from non-model organisms”, BMC bioinformatics, vol. 15, no. 1, p. 350, 2014.

J. L. Donnelly, Adams, D. C., and Dekker, J., “Weedy Adaptation in Setaria spp.: VI. S. faberi Seed hull shape as soil germination signal antenna”, arXiv preprint arXiv:1403.7064, 2014.

N. M. Caruso, Sears, M. W., Adams, D. C., and Lips, K. R., “Widespread rapid reductions in body size of adult salamanders in response to climate change”, Global change biology, vol. 20, no. 6, pp. 1751-1759, 2014.

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