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Journal Article
W. A. N. G. Kunbo, Wendel, J. F., and Jinping, H. U. A., Designations for individual genomes and chromosomes in Gossypium, Journal of Cotton Research, vol. 1, no. 1, p. 3, 2018.
R. C. Schultz, Tufekcioglu, A., Isenhart, T. M., Colletti, J. P., Raich, J. W., and Simpkins, W. W., Designing Riparian Buffers to Improve their Function, 2005.
A. J. Reinisch, Dong, J. - M., Brubaker, C. L., Stelly, D. M., Wendel, J. F., and Paterson, A. H., A detailed RFLP map of cotton, Gossypium hirsutum x Gossypium barbadense: chromosome organization and evolution in a disomic polyploid genome., Genetics, vol. 138, no. 3, pp. 829-847, 1994.
F. Jeltsch, Moloney, K., and Milton, S. J., Detecting process from snapshot pattern: lessons from tree spacing in the southern Kalahari, Oikos, pp. 451-466, 1999.
L. Zheng, Nason, J. D., Liang, D., Ge, X., and Yu, H. U. I., Development and Characterization of Microsatellite Loci for Ficus hirta (Moraceae), Applications in Plant Sciences, vol. 3, no. 7, p. 1500034, 2015.
E. - W. Tian, Yu, H. U. I., Zhang, D. - Y., and Nason, J. D., Development of microsatellite loci for Blastophaga javana (Agaonidae), the pollinating wasp of Ficus hirta (Moraceae), American journal of botany, vol. 98, no. 2, pp. e41-e43, 2011.
E. M. Rehm, Chojnacki, J., Rogers, H. S., and Savidge, J. A., Differences among avian frugivores in seed dispersal to degraded habitats, Restoration Ecology, 2017.
L. M. Martin and Wilsey, B. J., Differences in beta diversity between exotic and native grasslands vary with scale along a latitudinal gradient, 2015.
K. Halverson, Heard, S. B., Nason, J. D., and III, J. O. Stireman, Differential attack on diploid, tetraploid, and hexaploid Solidago altissima L. by five insect gallmakers, Oecologia, vol. 154, no. 4, pp. 755-761, 2008.
R. L. Small and Wendel, J. F., Differential evolutionary dynamics of duplicated paralogous Adh loci in allotetraploid cotton (Gossypium), Molecular biology and evolution, vol. 19, no. 5, pp. 597-607, 2002.
J. S. Hawkins, Kim, H. R., Nason, J. D., Wing, R. A., and Wendel, J. F., Differential lineage-specific amplification of transposable elements is responsible for genome size variation in Gossypium, Genome research, vol. 16, no. 10, pp. 1252-1261, 2006.
J. A. Vogel, Koford, R. R., and Debinski, D. M., Direct and indirect responses of tallgrass prairie butterflies to prescribed burning, Journal of Insect Conservation, vol. 14, no. 6, pp. 663-677, 2010.
M. L. Cayuela, Aguilera, E., Sanz-Cobena, A., Adams, D. C., Abalos, D., Barton, L., Ryals, R., Silver, W. L., Alfaro, M. A., and Pappa, V. A., Direct nitrous oxide emissions in Mediterranean climate cropping systems: Emission factors based on a meta-analysis of available measurement data, Agriculture, Ecosystems & Environment, 2016.
J. M. Serb, Discovery of genetically distinct sympatric lineages in the freshwater mussel Cyprogenia aberti (Bivalvia: Unionidae), Journal of Molluscan Studies, vol. 72, no. 4, pp. 425-434, 2006.
J. D. Nason, Aldrich, P. R., and Hamrick, J. L., Dispersal and the dynamics of genetic structure in fragmented tropical tree populations, Tropical Forest Remnants: Ecology Management and Conservation of Fragmented Communities. University of Chicago Press, Chicago, Illinois, pp. 304-320, 1997.
X. -ping Zhao, Si, Y., Hanson, R. E., Crane, C. F., H Price, J., Stelly, D. M., Wendel, J. F., and Paterson, A. H., Dispersed repetitive DNA has spread to new genomes since polyploid formation in cotton, Genome Research, vol. 8, no. 5, pp. 479-492, 1998.
D. M. Stelly, Wendel, J. F., and Paterson, A. H., Dispersed Repetitive DNA Has Spread to New Genomes Since Polyploid Formation in Cotton Xin-ping Zhao, Yang Si, Robert E. Hanson, 2 Charles F. Crane, 2 H. James Price, 2, Genome Research, vol. 8, pp. 479-492, 1998.
X. P. Zhao, Si, Y., Hanson, R. E., Crane, C. F., Price, H. J., Stelly, D. M., Wendel, J. F., and Paterson, N. H., Dispersed repetitive DNA has spread to new genomes since polyploid formation in cotton (vol 8, pg 479, 1998), GENOME RESEARCH, vol. 8, no. 6, pp. 682-682, 1998.
J. F. Wendel and Parks, C. R., Distorted segregation and linkage of alcohol dehydrogenase genes in Camellia japonica L.(Theacease), Biochemical genetics, vol. 22, no. 7-8, pp. 739-748, 1984.
L. Jesse, Collyer, M., Moloney, K., and Obrycki, J. J., Distribution of Megastigmus aculeatus (Hymenoptera: Torymidae) and the levels of seed predation of Rosa multiflora (Rosaceae), Weed Biology and Management, vol. 13, no. 3, pp. 79-88, 2013.
A. D. Keiser, Knoepp, J. D., and Bradford, M. A., Disturbance decouples biogeochemical cycles across forests of the southeastern US, Ecosystems, pp. 1-12, 2015.
Q. Pan, Wendel, J. F., and Fluhr, R., Divergent evolution of plant NBS-LRR resistance gene homologues in dicot and cereal genomes, Journal of molecular evolution, vol. 50, no. 3, pp. 203-213, 2000.
V. D. Picasso, E Brummer, C., Liebman, M., Dixon, P. M., and Wilsey, B. J., Diverse perennial crop mixtures sustain higher productivity over time based on ecological complementarity, Renewable Agriculture and Food Systems, vol. 26, no. 04, pp. 317-327, 2011.
L. L. Hinze, Hulse-Kemp, A. M., Wilson, I. W., Zhu, Q. - H., Llewellyn, D. J., Taylor, J. M., Spriggs, A., Fang, D. D., Ulloa, M., and Burke, J. J., Diversity analysis of cotton (Gossypium hirsutum L.) germplasm using the CottonSNP63K Array, BMC Plant Biology, vol. 17, no. 1, p. 37, 2017.
L. Gutiérrez, Nason, J. D., and Jannink, J. - L., Diversity and mega-targets of selection from the characterization of a barley collection, Crop science, vol. 49, no. 2, pp. 483-497, 2009.
F. Colchero, Jones, O. R., Conde, D. A., Hodgson, D., Zajitschek, P., Schmidt, B. R., Malo, A. F., Alberts, S. C., Becker, P. H., and Bouwhuis, S., The diversity of population responses to environmental change, Ecology Letters, 2018.
F. I. Isbell, Losure, D. A., Yurkonis, K. A., and Wilsey, B. J., Diversity–productivity relationships in two ecologically realistic rarity–extinction scenarios, Oikos, vol. 117, no. 7, pp. 996-1005, 2008.
R. Whitkus, Doebley, J., and Wendel, J. F., DNA-based markers in plants, Nuclear DNA markers in systematics and evolution. Kluwer, Amsterdam, pp. 116-141, 1994.
F. J. Janzen, Delaney, D. M., Mitchell, T. S., and Warner, D. A., Do covariances between maternal behavior and embryonic physiology drive sex-ratio evolution under environmental sex determination?, Journal of Heredity, 2019.
T. Escalona, Valenzuela, N., and Adams, D. C., Do Local Environmental Factors and Lunar Cycle Influence Timing and Synchrony of Oviposition of a Turtle with Strict Nocturnal Nesting?, Diversity, vol. 11, no. 5, p. 78, 2019.
T. L. Dickson, Hopwood, J. L., and Wilsey, B. J., Do priority effects benefit invasive plants more than native plants? An experiment with six grassland species, Biological Invasions, vol. 14, no. 12, pp. 2617-2624, 2012.
W. H Polley, Wilsey, B. J., and Derner, J. D., Do species evenness and plant density influence the magnitude of selection and complementarity effects in annual plant species mixtures?, Ecology Letters, vol. 6, no. 3, pp. 248-256, 2003.
J. M. Refsnider, Reedy, A. M., Warner, D. A., and Janzen, F. J., Do trade‐offs between predation pressures on females versus nests drive nest‐site choice in painted turtles?, Biological Journal of the Linnean Society, 2015.
W. R. Norris, Hemesath, L. M., Debinski, D. M., and Farrar, D. R., Does bird community composition vary along a disturbance gradient in northeast Iowa, USA, forests?, Natural Areas Journal, vol. 23, no. 3, pp. 262-273, 2003.
K. C. Voves, Mitchell, T. S., and Janzen, F. J., Does Natural Visual Camouflage Reduce Turtle Nest Predation?, The American Midland Naturalist, vol. 176, no. 1, pp. 166-172, 2016.
S. J. Snodgrass and Hufford, M. B., Domestication Genomics: Untangling the Complex History of African Rice, Current Biology, vol. 28, no. 14, pp. R786-R788, 2018.
W. H Polley, Wilsey, B. J., and Derner, J. D., Dominant species constrain effects of species diversity on temporal variability in biomass production of tallgrass prairie, Oikos, vol. 116, no. 12, pp. 2044-2052, 2007.
S. Renny-Byfield and Wendel, J. F., Doubling down on genomes: polyploidy and crop plants, American journal of botany, vol. 101, no. 10, pp. 1711-1725, 2014.
L. Lin, Pierce, G. J., Bowers, J. E., Estill, J. C., Compton, R. O., Rainville, L. K., Kim, C., Lemke, C., Rong, J., and Tang, H., A draft physical map of a D-genome cotton species (Gossypium raimondii), BMC genomics, vol. 11, no. 1, p. 395, 2010.
O. Panaud, Jackson, S. A., and Wendel, J. F., Drivers and dynamics of diversity in plant genomes, New Phytologist, vol. 202, no. 1, pp. 15-18, 2014.
D. J Scasta, Engle, D. M., Talley, J. L., Weir, J. R., Fuhlendorf, S. D., and Debinski, D. M., Drought influences control of parasitic flies of cattle on pastures managed with patch-burn grazing, Rangeland Ecology & Management, vol. 68, no. 3, pp. 290-297, 2015.
D. J Scasta, Engle, D. M., Talley, J. L., Weir, J. R., Fuhlendorf, S. D., and Debinski, D. M., Drought Influences Control of Parasitic Flies of Cattle on Pastures Managed with Patch-Burn Grazing, Rangeland Ecology & Management, 2015.
O. Fedrigo, Adams, D. C., and Naylor, G. J. P., DRUIDS—Detection of regions with unexpected internal deviation from stationarity, Journal of Experimental Zoology Part B: Molecular and Developmental Evolution, vol. 304, no. 2, pp. 119-128, 2005.
L. E. Flagel, Wendel, J. F., and Udall, J. A., Duplicate gene evolution, homoeologous recombination, and transcriptome characterization in allopolyploid cotton, BMC genomics, vol. 13, no. 1, p. 302, 2012.
L. Flagel, Udall, J., Nettleton, D., and Wendel, J. F., Duplicate gene expression in allopolyploid Gossypium reveals two temporally distinct phases of expression evolution, BMC biology, vol. 6, no. 1, p. 16, 2008.
J. F. Wendel, Stuber, C. W., Edwards, M. D., and Goodman, M. M., Duplicated chromosome segments in maize (Zea mays L.): further evidence from hexokinase isozymes, TAG Theoretical and Applied Genetics, vol. 72, no. 2, pp. 178-185, 1986.
R. C. Cronn, Small, R. L., and Wendel, J. F., Duplicated genes evolve independently after polyploid formation in cotton, Proceedings of the National Academy of Sciences, vol. 96, no. 25, pp. 14406-14411, 1999.
J. F. Wendel, Stuber, C. W., Goodman, M. M., and Beckett, J. B., Duplicated plastid and triplicated cytosolic isozymes of triosephosphate isomerase in maize (Zea mays L.), Journal of Heredity, vol. 80, no. 3, pp. 218-228, 1989.
S. A. Levin, Moloney, K., Buttel, L., and Castillo-Chavez, C., Dynamical models of ecosystems and epidemics, Future generation computer systems, vol. 5, no. 2, pp. 265-274, 1989.
K. L. Adams and Wendel, J. F., Dynamics of duplicated gene expression in Polyploid Cotton, Polyploid and hybrid genomics, pp. 187-194, 2013.

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