Publications

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2014
L. Gong, Olson, M., and Wendel, J. F., “Cytonuclear evolution of rubisco in four allopolyploid lineages”, Molecular biology and evolution, vol. 31, no. 10, pp. 2624-2636, 2014.
S. Renny-Byfield and Wendel, J. F., “Doubling down on genomes: polyploidy and crop plants”, American journal of botany, vol. 101, no. 10, pp. 1711-1725, 2014.
O. Panaud, Jackson, S. A., and Wendel, J. F., “Drivers and dynamics of diversity in plant genomes”, New Phytologist, vol. 202, no. 1, pp. 15-18, 2014.
C. Xu, Bai, Y., Lin, X., Zhao, N., Hu, L., Gong, Z., Wendel, J. F., and Liu, B., “Genome-wide disruption of gene expression in allopolyploids but not hybrids of rice subspecies”, Molecular biology and evolution, vol. 31, no. 5, pp. 1066-1076, 2014.
J. E. Coate, Buggs, R. J. A., Wendel, J. F., Doyle, J. J., Soltis, D. E., and Soltis, P. S., “The legacy of diploid progenitors in allopolyploid gene”, 2014.
R. J. A. Buggs, Wendel, J. F., Doyle, J. J., Soltis, D. E., Soltis, P. S., and Coate, J. E., “The legacy of diploid progenitors in allopolyploid gene expression patterns”, Philosophical Transactions of the Royal Society B: Biological Sciences, vol. 369, no. 1648, p. 20130354, 2014.
C. E. Grover, Zhu, X., Grupp, K. K., Jareczek, J. J., Gallagher, J. P., Szadkowski, E., Seijo, J. G., and Wendel, J. F., “Molecular confirmation of species status for the allopolyploid cotton species, Gossypium ekmanianum Wittmack”, Genetic Resources and Crop Evolution, vol. 62, no. 1, pp. 103-114, 2014.
M. L. Ainouche and Wendel, J. F., “Polyploid speciation and genome evolution: Lessons from recent allopolyploids”, in Evolutionary Biology: Genome Evolution, Speciation, Coevolution and Origin of Life, Springer International Publishing, 2014, pp. 87-113.
G. Hu, Koh, J., Yoo, M. - J., Pathak, D., Chen, S., and Wendel, J. F., “Proteomics profiling of fiber development and domestication in upland cotton (Gossypium hirsutum L.)”, Planta, vol. 240, no. 6, pp. 1237-1251, 2014.
2015
C. E. Grover, Gallagher, J. P., and Wendel, J. F., “Candidate Gene Identification of Flowering Time Genes in Cotton”, The Plant Genome, 2015.
L. Gong, Masonbrink, R. E., Grover, C. E., Renny-Byfield, S., and Wendel, J. F., “A Cluster of Recently Inserted Transposable Elements Associated with siRNAs in”, The Plant Genome, 2015.
G. Hu, Koh, J., Yoo, M. - J., Chen, S., and Wendel, J. F., “Gene-Expression Novelty in Allopolyploid Cotton: A Proteomic Perspective”, Genetics, 2015.
G. Hu, Koh, J., Yoo, M. - J., Chen, S., and Wendel, J. F., “Gene-Expression Novelty in Allopolyploid Cotton: A Proteomic Perspective”, Genetics, vol. 200, no. 1, pp. 91-104, 2015.
J. McD. Stewart, Craven, L. A., Brubaker, C., and Wendel, J. F., “Gossypium anapoides (Malvaceae), a new species from Western Australia”, Novon, vol. 23, no. 4, pp. 447-451, 2015.
L. ‐F. Li, Liu, B., Olsen, K. M., and Wendel, J. F., “Multiple rounds of ancient and recent hybridizations have occurred within the Aegilops–Triticum complex”, New Phytologist, 2015.
S. Renny-Byfield, Gong, L., Gallagher, J. P., and Wendel, J. F., “Persistence of Subgenomes in Paleopolyploid Cotton after 60 My of Evolution”, Molecular biology and evolution, vol. 32, no. 4, pp. 1063-1071, 2015.
C. E. Grover, Gallagher, J. P., Jareczek, J. J., Page, J. T., Udall, J. A., Gore, M. A., and Wendel, J. F., “Re-evaluating the phylogeny of allopolyploid Gossypium L.”, Molecular phylogenetics and evolution, vol. 92, pp. 45-52, 2015.
C. E. Grover, Gallagher, J. P., Jareczek, J. J., Page, J. T., Udall, J. A., Gore, M. A., and Wendel, J. F., “Re-evaluating the phylogeny of allopolyploid Gossypium L”, Molecular Phylogenetics and Evolution, 2015.
L. ‐F. Li, Liu, B., Olsen, K. M., and Wendel, J. F., “A re‐evaluation of the homoploid hybrid origin of Aegilops tauschii, the donor of the wheat D‐subgenome”, New Phytologist, 2015.
J. F. Wendel and Grover, C. E., “Taxonomy and Evolution of the Cotton Genus, Gossypium”, Cotton, no. agronmonogr57, 2015.
R. Hovav, Faigenboim-Doron, A., Kadmon, N., Hu, G., Zhang, X., Gallagher, J. P., and Wendel, J. F., “A Transcriptome Profile for Developing Seed of Polyploid Cotton”, The Plant Genome, vol. 8, no. 1, 2015.
A. H. Paterson and Wendel, J. F., “Unraveling the fabric of polyploidy”, Nature biotechnology, vol. 33, no. 5, pp. 491-493, 2015.
A. H. Paterson and Wendel, J. F., “Unraveling the fabric of polyploidy”, Nature Biotechnology, vol. 33, no. 5, pp. 491-493, 2015.

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