Publications

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2015
G. Hu, Koh, J., Yoo, M. - J., Chen, S., and Wendel, J. F., “Gene-Expression Novelty in Allopolyploid Cotton: A Proteomic Perspective”, Genetics, vol. 200, no. 1, pp. 91-104, 2015.
G. Hu, Koh, J., Yoo, M. - J., Chen, S., and Wendel, J. F., “Gene-Expression Novelty in Allopolyploid Cotton: A Proteomic Perspective”, Genetics, 2015.
J. McD. Stewart, Craven, L. A., Brubaker, C., and Wendel, J. F., “Gossypium anapoides (Malvaceae), a new species from Western Australia”, Novon, vol. 23, no. 4, pp. 447-451, 2015.
J. Liu, Feng, C., Wang, D., Wang, L., Wilsey, B. J., and Zhong, Z., “Impacts of grazing by different large herbivores in grassland depend on plant species diversity”, Journal of Applied Ecology, 2015.
J. M. Jandt, Thomson, J. L., Geffre, A. C., and Toth, A. L., “Lab rearing environment perturbs social traits: a case study with Polistes wasps”, Behavioral Ecology, p. arv082, 2015.
E. Tian, Nason, J. D., Machado, C. A., Zheng, L., Yu, H. U. I., and Kjellberg, F., “Lack of genetic isolation by distance, similar genetic structuring but different demographic histories in a fig‐pollinating wasp mutualism”, Molecular Ecology, 2015.
D. Allen McGranahan, Engle, D. M., Mulloy, J. T., Miller, J. R., and Debinski, D. M., “Land‐use history and an invasive grass affect tallgrass prairie sedge community composition”, Applied Vegetation Science, vol. 18, no. 2, pp. 209-219, 2015.
E. Sherratt, Adams, D. C., and Serb, J. M., “Macroevolution, phylomorphospace and directional evolution in recessing scallops”, INTEGRATIVE AND COMPARATIVE BIOLOGY, vol. 55. OXFORD UNIV PRESS INC JOURNALS DEPT, 2001 EVANS RD, CARY, NC 27513 USA, pp. E166-E166, 2015.
T. S. Schwartz, Arendsee, Z. W., and Bronikowski, A. M., “Mitochondrial divergence between slow-and fast-aging garter snakes”, Experimental Gerontology, 2015.
W. Pett and Lavrov, D., “Mito-nuclear interactions in the evolution of animal mitochondrial tRNA metabolism”, Genome Biology and Evolution, p. evv124, 2015.
A. C. Kraemer, Serb, J. M., and Adams, D. C., “Model toxin level does not directly influence the evolution of mimicry in the salamander Plethodon cinereus”, Evolutionary Ecology, pp. 1-13, 2015.
A. C. Kraemer, Serb, J. M., and Adams, D. C., “Model toxin level does not directly influence the evolution of mimicry in the salamander Plethodon cinereus”, Evolutionary Ecology, pp. 1-13, 2015.
A. M. Wright, Lloyd, G. T., and Hillis, D. M., “Modeling character change heterogeneity in phylogenetic analyses of morphology through the use of priors”, Systematic Biology, p. syv122, 2015.
E. Ruiz-Sanchez, Clark, L. G., Londoño, X., Mejía-Saulés, T., and Cortés, G., “Morphological keys to the genera and species of bamboos (Poaceae: Bambusoideae) of Mexico”, Phytotaxa, vol. 236, no. 1, pp. 1-24, 2015.
L. ‐F. Li, Liu, B., Olsen, K. M., and Wendel, J. F., “Multiple rounds of ancient and recent hybridizations have occurred within the Aegilops–Triticum complex”, New Phytologist, 2015.
J. S. S. Denton and Adams, D. C., “A new phylogenetic test for comparing multiple high‐dimensional evolutionary rates suggests interplay of evolutionary rates and modularity in lanternfishes (Myctophiformes; Myctophidae)”, Evolution, 2015.
D. C. Adams and Collyer, M. L., “Permutation tests for phylogenetic comparative analyses of high‐dimensional shape data: What you shuffle matters”, Evolution, vol. 69, no. 3, pp. 823-829, 2015.
S. Renny-Byfield, Gong, L., Gallagher, J. P., and Wendel, J. F., “Persistence of Subgenomes in Paleopolyploid Cotton after 60 My of Evolution”, Molecular biology and evolution, vol. 32, no. 4, pp. 1063-1071, 2015.
A. Kaliontzopoulou and Adams, D. C., “Phylogenies, the Comparative Method, and the Conflation of Tempo and Mode.”, Systematic biology, 2015.
D. Badenhorst, Hillier, L. W., Literman, R., Montiel, E. E., Radhakrishnan, S., Shen, Y., Minx, P., Janes, D., Warren, W. C., and Edwards, S. V., “Physical mapping and refinement of the painted turtle genome (Chrysemys picta) inform amniote genome evolution and challenges turtle-bird chromosomal conservation.”, Genome biology and evolution, 2015.
J. M. Jandt and Toth, A. L., “Physiological and Genomic Mechanisms of Social Organization in Wasps (Family: Vespidae)”, Advances in Insect Physiology, 2015.
D. D. Houston, R Evans, P., and Shiozawa, D. K., “Pluvial Drainage Patterns and Holocene Desiccation Influenced the Genetic Architecture of Relict Dace, Relictus solitarius (Teleostei: Cyprinidae)”, PloS one, vol. 10, no. 9, p. e0138433, 2015.
A. Sethuraman, Janzen, F. J., and Obrycki, J., “Population genetics of the predatory lady beetle Hippodamia convergens”, Biological Control, vol. 84, pp. 1-10, 2015.
S. Salvidio, Crovetto, F., and Adams, D. C., “Potential rapid evolution of foot morphology in Italian plethodontid salamanders (Hydromantes strinatii) following the colonization of an artificial cave”, Journal of Evolutionary Biology, 2015.
S. Salvidio, Crovetto, F., and Adams, D. C., “Potential rapid evolution of foot morphology in Italian plethodontid salamanders (Hydromantes strinatii) following the colonization of an artificial cave”, Journal of evolutionary biology, 2015.
T. Patrick Lyons, Miller, J. R., Debinski, D. M., and Engle, D. M., “Predator identity influences the effect of habitat management on nest predation”, Ecological Applications, 2015.
M. Tang, Chen, Z., Grover, C. E., Wang, Y., Li, S., Liu, G., Ma, Z., Wendel, J. F., and Hua, J., “Rapid evolutionary divergence of Gossypium barbadense and G. hirsutum mitochondrial genomes”, BMC Genomics, vol. 16, no. 1, p. 770, 2015.
S. E. McGaugh, Bronikowski, A. M., Kuo, C. - H., Reding, D. M., Addis, E. A., Flagel, L. E., Janzen, F. J., and Schwartz, T. S., “Rapid molecular evolution across amniotes of the IIS/TOR network”, Proceedings of the National Academy of Sciences, p. 201419659, 2015.
C. E. Grover, Gallagher, J. P., Jareczek, J. J., Page, J. T., Udall, J. A., Gore, M. A., and Wendel, J. F., “Re-evaluating the phylogeny of allopolyploid Gossypium L.”, Molecular phylogenetics and evolution, vol. 92, pp. 45-52, 2015.
C. E. Grover, Gallagher, J. P., Jareczek, J. J., Page, J. T., Udall, J. A., Gore, M. A., and Wendel, J. F., “Re-evaluating the phylogeny of allopolyploid Gossypium L”, Molecular Phylogenetics and Evolution, 2015.
J. L. Cotton, Wysocki, W. P., Clark, L. G., Kelchner, S. A., J Pires, C., Edger, P. P., Mayfield-Jones, D., and Duvall, M. R., “Resolving deep relationships of PACMAD grasses: a phylogenomic approach”, BMC Plant Biology, vol. 15, no. 1, p. 178, 2015.
B. A. Middleton, van der Valk, A. G., and Davis, C. B., “Responses to water depth and clipping of twenty-three plant species in an Indian monsoonal wetland”, Aquatic Botany, 2015.
L. ‐F. Li, Liu, B., Olsen, K. M., and Wendel, J. F., “A re‐evaluation of the homoploid hybrid origin of Aegilops tauschii, the donor of the wheat D‐subgenome”, New Phytologist, 2015.
J. T. Delaney, Jokela, K. J., and Debinski, D. M., “Seasonal succession of pollinator floral resources in four types of grasslands”, Ecosphere, vol. 6, no. 11, p. art243, 2015.
L. Clark, “Sebacina aureomagnifica, a new heterobasidiomycete from the Atlantic Forest of northeast Brazil”, Mycological Progress, vol. 14, p. 109, 2015.
J. W. Raich and Schulz, R., “Soil health and productivity in riparian grass buffers: A re-evaluation after 13 years”, 2015.
A. Fuentes-Ramirez, Schafer, J. L., Mudrak, E. L., Schat, M., Parag, H. A., Holzapfel, C., and Moloney, K. A., “Spatio-temporal impacts of fire on soil nutrient availability in Larrea tridentata shrublands of the Mojave Desert, USA”, Geoderma, vol. 259, pp. 126-133, 2015.
A. J. Porath-Krause, Pairett, A. N., Faggionato, D., and Serb, J. M., “Structure and spatial expression differences among duplicated rhabdomeric opsins indicate functional change in photoreception of the scallop”, INTEGRATIVE AND COMPARATIVE BIOLOGY, vol. 55. OXFORD UNIV PRESS INC JOURNALS DEPT, 2001 EVANS RD, CARY, NC 27513 USA, pp. E144-E144, 2015.
L. R. Hansen, Hellerstein, D., Ribaudo, M., Williamson, J., Nulph, D., Loesch, C., and Crumpton, W., “Targeting Investments to Cost Effectively Restore andn Protect Wetland Ecosystems: Some Economic Insights”, United States Department of Agriculture, 2015.
J. F. Wendel and Grover, C. E., “Taxonomy and Evolution of the Cotton Genus, Gossypium”, Cotton, no. agronmonogr57, 2015.
Y. Mu, Zhao, B., Sun, B. J., Zeng, Z. G., Valenzuela, N., and DU, W. G., “Temperature-Dependent Sex Determination Ruled Out in the Chinese Soft-Shelled Turtle (Pelodiscus sinensis) via Molecular Cytogenetics and Incubation Experiments across Populations”, Sexual Development, vol. 9, no. 2, 2015.
J. M. Refsnider and Janzen, F. J., “Temperature-Dependent Sex Determination under Rapid Anthropogenic Environmental Change: Evolution at a Turtle’s Pace?”, Journal of Heredity, p. esv053, 2015.
D. Allen McGranahan, Hovick, T., Elmore, R. Dwayne, Engle, D. M., Fuhlendorf, S. D., Winter, S., Miller, J. R., and Debinski, D. M., “Temporal variability in aboveground plant biomass decreases as spatial variability increases”, Ecology, 2015.
E. M. Bach and Hofmockel, K. S., “A time for every season: soil aggregate turnover stimulates decomposition and reduces carbon loss in grasslands managed for bioenergy”, GCB Bioenergy, 2015.
B. J. Wilsey and Martin, L. M., “Top‐down control of rare species abundances by native ungulates in a grassland restoration”, Restoration Ecology, 2015.
, “Tradeoffs and coexistence in fluctuating environments: evidence for a key dispersal-fecundity tradeoff in five nonpollinating fig wasps”, American Naturalist, vol. 186, pp. 151-158, 2015.
R. Hovav, Faigenboim-Doron, A., Kadmon, N., Hu, G., Zhang, X., Gallagher, J. P., and Wendel, J. F., “A Transcriptome Profile for Developing Seed of Polyploid Cotton”, The Plant Genome, vol. 8, no. 1, 2015.
N. G. Davis, Houston, D. D., and Nason, J. D., “Transcriptome-Facilitated Development of SNPs for the Sonoran Desert Rock Fig, Ficus petiolaris (Moraceae)”, Applications in Plant Sciences, vol. 3, no. 7, p. 1500028, 2015.
J. W. Rice, Clough, M. P., Olson, J. K., Adams, D. C., and Colbert, J. T., “University faculty and their knowledge & acceptance of biological evolution”, Evolution: Education and Outreach, vol. 8, no. 1, p. 8, 2015.
A. H. Paterson and Wendel, J. F., “Unraveling the fabric of polyploidy”, Nature biotechnology, vol. 33, no. 5, pp. 491-493, 2015.

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