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2003

R. Cronn, Small, R. L., Haselkorn, T., and Wendel, J. F., “Cryptic repeated genomic recombination during speciation in Gossypium gossypioides”, Evolution, vol. 57, no. 11, pp. 2475-2489, 2003.

W. H Polley, Wilsey, B. J., and Derner, J. D., “Do species evenness and plant density influence the magnitude of selection and complementarity effects in annual plant species mixtures?”, Ecology Letters, vol. 6, no. 3, pp. 248-256, 2003.

W. R. Norris, Hemesath, L. M., Debinski, D. M., and Farrar, D. R., “Does bird community composition vary along a disturbance gradient in northeast Iowa, USA, forests?”, Natural Areas Journal, vol. 23, no. 3, pp. 262-273, 2003.

B. J. Wilsey and H Polley, W., “Effects of seed additions and grazing history on diversity and productivity of subhumid grasslands”, Ecology, vol. 84, no. 4, pp. 920-931, 2003.

B. Liu and Wendel, J. F., “Epigenetic phenomena and the evolution of plant allopolyploids”, Molecular phylogenetics and evolution, vol. 29, no. 3, pp. 365-379, 2003.

M. L. Cedroni, Cronn, R. C., Adams, K. L., Wilkins, T. A., and Wendel, J. F., “Evolution and expression of MYB genes in diploid and polyploid cotton”, Plant molecular biology, vol. 51, no. 3, pp. 313-325, 2003.

M. C. Wichmann, Johst, K., Moloney, K. A., Wissel, C., and Jeltsch, F., “Extinction risk in periodically fluctuating environments”, Ecological Modelling, vol. 167, no. 3, pp. 221-231, 2003.

K. L. Adams, Cronn, R., Percifield, R., and Wendel, J. F., “Genes duplicated by polyploidy show unequal contributions to the transcriptome and organ-specific reciprocal silencing”, Proceedings of the National Academy of Sciences, vol. 100, no. 8, pp. 4649-4654, 2003.

M. M. Cerney, Adams, D. C., and Vance, J. M., “Image Warping of Three-Dimensional Body Scan Data”, SAE Technical Paper, 2003.

M. C. Wichmann, Jeltsch, F., W Dean, R. J., Moloney, K. A., and Wissel, C., “Implication of climate change for the persistence of raptors in arid savanna”, Oikos, vol. 102, no. 1, pp. 186-202, 2003.

J. W. Raich, Potter, C. S., and Bhagawati, D., “Interannual Variability in Global Soil Respiration on a 0.5 Degree Grid Cell Basis (1980-1994)(NDP-081)”, 2003.

J. M. Serb, Buhay, J. E., and Lydeard, C., “Molecular systematics of the North American freshwater bivalve genus Quadrula (Unionidae: Ambleminae) based on mitochondrial ND1 sequences”, Molecular phylogenetics and evolution, vol. 28, no. 1, pp. 1-11, 2003.

D. D. Kassam, Adams, D. C., Hori, M., and Yamaoka, K., “Morphometric analysis on ecomorphologically equivalent cichlid species from Lakes Malawi and Tanganyika”, Journal of Zoology, vol. 260, no. 02, pp. 153-157, 2003.

D. Ashlock, Adams, D. C., and Doty, D., “Morphometric grayscale texture analysis using foot patterns”, Evolutionary Computation, 2003. CEC'03. The 2003 Congress on, vol. 3. IEEE, pp. 1575-1581, 2003.

N. Valenzuela, Adams, D. C., and Janzen, F. J., “Pattern does not equal process: exactly when is sex environmentally determined?”, The American Naturalist, vol. 161, no. 4, pp. 676-683, 2003.

A. Schnabel, McDonel, P. E., and Wendel, J. F., “Phylogenetic relationships in Gleditsia (Leguminosae) based on ITS sequences”, American journal of botany, vol. 90, no. 2, pp. 310-320, 2003.

J. F. Wendel and Cronn, R. C., “Polyploidy and the evolutionary history of cotton”, Advances in agronomy, vol. 78, pp. 139-186, 2003.

D. S. Senchina, Álvarez, I., Cronn, R. C., Liu, B., Rong, J., Noyes, R. D., Paterson, A. H., Wing, R. A., Wilkins, T. A., and Wendel, J. F., “Rate variation among nuclear genes and the age of polyploidy in Gossypium”, Molecular biology and evolution, vol. 20, no. 4, pp. 633-643, 2003.

R. D. Holt and Debinski, D. M., “Reflections on landscape experiments and ecological theory: tools for the study of habitat fragmentation”, in How Landscapes Change, Springer, 2003, pp. 201-223.

I. Álvarez and Wendel, J. F., “Ribosomal ITS sequences and plant phylogenetic inference”, Molecular phylogenetics and evolution, vol. 29, no. 3, pp. 417-434, 2003.

J. M. Serb and Harris, J. Lowrey, Taxonomic Status of the Endangered Winged Mapleleaf Quadrula Fragosa (Conrad, 1835) in Arkansas Using Mitochondrial DNA Sequence of the ND1 Gene: Final Report. 2003.

M. Y. Chung, Nason, J. D., Epperson, B. K., and Chung, M. G., “Temporal aspects of the fine-scale genetic structure in a population of Cinnamomum insularimontanum (Lauraceae)”, Heredity, vol. 90, no. 1, pp. 98-106, 2003.

G. J. P. Naylor and Adams, D. C., “Total evidence versus relevant evidence: response to O’Leary et al. (2003)”, Systematic Biology, vol. 52, pp. 864-865, 2003.

D. Debinski, “Trophic Cascades and Biodiversity in Grand Teton National Park”, University of Wyoming National Park Service Research Center Annual Report, vol. 27, no. 1, pp. 28-32, 2003.

A. M. Nickel, Danielson, B. J., and Moloney, K. A., “Wooded habitat edges as refugia from microtine herbivory in tallgrass prairies”, Oikos, vol. 100, no. 3, pp. 525-533, 2003.

2004

J. Rong, Abbey, C., Bowers, J. E., Brubaker, C. L., Chang, C., Chee, P. W., Delmonte, T. A., Ding, X., Garza, J. J., and Marler, B. S., “A 3347-locus genetic recombination map of sequence-tagged sites reveals features of genome organization, transmission and evolution of cotton (Gossypium)”, Genetics, vol. 166, no. 1, pp. 389-417, 2004.

M. V. Santelmann, White, D., Freemark, K., Nassauer, J. Iverson, Eilers, J. M., Vache, K. B., Danielson, B. J., Corry, R. C., Clark, M. E., and Polasky, S. T. E. P. H. E. N., “Assessing alternative futures for agriculture in Iowa, USA”, Landscape ecology, vol. 19, no. 4, pp. 357-374, 2004.

J. C. Su, Debinski, D. M., Jakubauskas, M. E., and Kindscher, K., “Beyond species richness: Community similarity as a measure of cross‐taxon congruence for coarse‐filter conservation”, Conservation Biology, vol. 18, no. 1, pp. 167-173, 2004.

D. C. Adams, “Character displacement via aggressive interference in Appalachian salamanders”, Ecology, vol. 85, no. 10, pp. 2664-2670, 2004.

R. Cronn and Wendel, J. F., “Cryptic trysts, genomic mergers, and plant speciation”, New Phytologist, vol. 161, no. 1, pp. 133-142, 2004.

K. L. Adams and Wendel, J. F., “Exploring the genomic mysteries of polyploidy in cotton”, Biological Journal of the Linnean Society, vol. 82, no. 4, pp. 573-581, 2004.

D. Kassam, Adams, D. C., and Yamaoka, K., “Functional significance of variation in trophic morphology within feeding microhabitat-differentiated cichlid species in Lake Malawi”, Animal biology, vol. 54, no. 1, pp. 77-90, 2004.

N. Valenzuela, Adams, D. C., Bowden, R. M., Gauger, A. C., and Douglas, M. E., “Geometric morphometric sex estimation for hatchling turtles: a powerful alternative for detecting subtle sexual shape dimorphism”, Copeia, vol. 2004, no. 4, pp. 735-742, 2004.

D. C. Adams, F Rohlf, J., and Slice, D. E., “Geometric morphometrics: ten years of progress following the ‘revolution’”, Italian Journal of Zoology, vol. 71, no. 1, pp. 5-16, 2004.

M. Yoon Chung, Nason, J. D., and Chung, M. Gi, “Implications of clonal structure for effective population size and genetic drift in a rare terrestrial orchid, Cremastra appendiculata”, Conservation Biology, vol. 18, no. 6, pp. 1515-1524, 2004.

C. E. Grover, Kim, H. R., Wing, R. A., Paterson, A. H., and Wendel, J. F., “Incongruent patterns of local and global genome size evolution in cotton”, Genome research, vol. 14, no. 8, pp. 1474-1482, 2004.

J. Dewoody, Nason, J. D., and Smith, M., “Inferring demographic processes from the genetic structure of a metapopulation of Boltonia decurrens (Asteraceae)”, Conservation Genetics, vol. 5, no. 5, pp. 603-617, 2004.

A. Loy, Corti, M., Adams, D. C., Slice, D. E., and F Rohlf, J., “Introduction to the proceedings of the Rome 2002 Geometric Morphometrics workshop. Homage to Leslie F. Marcus”, 2004.

R. L. Small, Cronn, R. C., and Wendel, J. F., “LAS Johnson Review No. 2. Use of nuclear genes for phylogeny reconstruction in plants”, Australian Systematic Botany, vol. 17, no. 2, pp. 145-170, 2004.

J. Tews, Moloney, K., and Jeltsch, F., “Modeling seed dispersal in a variable environment: a case study of the fleshy-fruited savanna shrub Grewia flava”, Ecological Modelling, vol. 175, no. 1, pp. 65-76, 2004.

R. E. VanNimwegen and Debinski, D. M., “Nest Success of Yellow Warblers in Willow Habitats: The Role of Surface Water and Snakes”, University of Wyoming National Park Service Research Center Annual Report, vol. 28, no. 1, pp. 53-57, 2004.

K. L. Adams, Percifield, R., and Wendel, J. F., “Organ-specific silencing of duplicated genes in a newly synthesized cotton allotetraploid”, Genetics, vol. 168, no. 4, pp. 2217-2226, 2004.

L. H. Rieseberg and Wendel, J. F., “Plant speciation–rise of the poor cousins”, New Phytologist, vol. 161, no. 1, pp. 3-8, 2004.

R. J. Dyer and Nason, J. D., “Population graphs: the graph theoretic shape of genetic structure”, Molecular Ecology, vol. 13, no. 7, pp. 1713-1727, 2004.

, “Proceedings of the Rome Geometric Morphometric Workshop. Homage to Leslie F. Marcus”, in Special Publication of the Italian Journal of Zoology, vol. 71, no. 1, Mucchi Editore, 2004, pp. 1-88.

B. J. Wilsey and H Polley, W., “Realistically low species evenness does not alter grassland species-richness-productivity relationships”, Ecology, vol. 85, no. 10, pp. 2693-2700, 2004.

J. M. Serb and Oakley, T. H., “Reconciled phylogenetic trees as an emerging analytical framework for evolutionary developmental biology”, INTEGRATIVE AND COMPARATIVE BIOLOGY, vol. 44, no. 6. SOC INTEGRATIVE COMPARATIVE BIOLOGY 1313 DOLLEY MADISON BLVD, NO 402, MCLEAN, VA 22101 USA, pp. 639-639, 2004.

T. Wiegand and Moloney, K. A., “Rings, circles, and null‐models for point pattern analysis in ecology”, Oikos, vol. 104, no. 2, pp. 209-229, 2004.

C. C. Swart and Adams, D. C., “The role of muscle mass and tooth number in ecological character displacement between Plethodon cinereus and P. hoffmani (Caudata: Plethodontidae)”, Herpetologica, vol. 60, no. 4, pp. 408-413, 2004.

M. M. Cerney and Adams, D. C., “Sequestering Size: The Role of Allometry and Gender in Digital Human Modeling”, Proceedings of the SAE Digital Human Modeling Conference. pp. 2004-04DHM-38, 2004.

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