Publications

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2012
A. P. Kuester and Nason, J. D., “Microsatellite loci for Gossypium davidsonii (Malvaceae) and other D-genome, Sonoran Desert endemic cotton species”, American journal of botany, vol. 99, no. 3, pp. e91-e93, 2012.
A. C. Kraemer, Kissner, J., and Adams, D. C., “Morphological color-change in the red-backed salamander (Plethodon cinereus) while kept in captivity”, Copeia, vol. 2012, no. 4, pp. 748-755, 2012.
J. R. Miller, Morton, L. Wright, Engle, D. M., Debinski, D. M., and Harr, R. N., “Nature reserves as catalysts for landscape change”, Frontiers in Ecology and the Environment, vol. 10, no. 3, pp. 144-152, 2012.
N. Bjarnholt, Nakonieczny, M., Kędziorski, A., Debinski, D. M., Matter, S. F., Olsen, C. Erik, and Zagrobelny, M., “Occurrence of sarmentosin and other hydroxynitrile glucosides in Parnassius (Papilionidae) butterflies and their food plants”, Journal of chemical ecology, vol. 38, no. 5, pp. 525-537, 2012.
D. C. Adams and Otárola-Castillo, E., “Package ‘geomorph’: Geometric morphometric analysis of 2d/3d landmark data”, R package version, vol. 1, 2012.
J. Greilhuber, Dolezel, J., Leitch, I. J., and Wendel, J. F., Plant Genome Diversity: Vol. 1: Plant Genomes, Their Residents, and Their Evolutionary Dynamics. Springer, 2012.
I. J. Leitch, Greilhuber, J., Dolezel, J., and Wendel, J. F., Plant Genome Diversity Volume 2: Physical Structure, Behaviour and Evolution of Plant Genomes, vol. 2. Springer Science & Business Media, 2012.
A. P. Kuester, Jones, R. W., Sappington, T. W., Kim, K. Seok, Barr, N. B., Roehrdanz, R. L., Senechal, P., and Nason, J. D., “Population structure and genetic diversity of the boll weevil (Coleoptera: Curculionidae) on Gossypium in North America”, Annals of the Entomological Society of America, vol. 105, no. 6, pp. 902-916, 2012.
A. E. Russell and Raich, J. W., “Rapidly growing tropical trees mobilize remarkable amounts of nitrogen, in ways that differ surprisingly among species”, Proceedings of the National Academy of Sciences, vol. 109, no. 26, pp. 10398-10402, 2012.
A. M. Sparkman, Schwartz, T. S., Madden, J. A., Boyken, S. E., Ford, N. B., Serb, J. M., and Bronikowski, A. M., “Rates of molecular evolution vary in vertebrates for insulin-like growth factor-1 (IGF-1), a pleiotropic locus that regulates life history traits”, General and comparative endocrinology, vol. 178, no. 1, pp. 164-173, 2012.
D. L. Rabosky and Adams, D. C., “Rates of morphological evolution are correlated with species richness in salamanders”, Evolution, vol. 66, no. 6, pp. 1807-1818, 2012.
A. Kaliontzopoulou, Adams, D. C., van der Meijden, A., Perera, A., and Carretero, M. A., “Relationships between head morphology, bite performance and ecology in two species of Podarcis wall lizards”, Evolutionary Ecology, vol. 26, no. 4, pp. 825-845, 2012.
A. H. Paterson, Wendel, J. F., Gundlach, H., Guo, H., Jenkins, J., Jin, D., Llewellyn, D., Showmaker, K. C., Shu, S., and Udall, J., “Repeated polyploidization of Gossypium genomes and the evolution of spinnable cotton fibres”, Nature, vol. 492, no. 7429, pp. 423-427, 2012.
D. A. McGranahan, Engle, D. M., Fuhlendorf, S. D., Winter, S. J., Miller, J. R., and Debinski, D. M., “Spatial heterogeneity across five rangelands managed with pyric‐herbivory”, Journal of Applied Ecology, vol. 49, no. 4, pp. 903-910, 2012.
A. Salmon, Udall, J. A., Jeddeloh, J. A., and Wendel, J. F., “Targeted capture of homoeologous coding and noncoding sequence in polyploid cotton”, G3: Genes| Genomes| Genetics, vol. 2, no. 8, pp. 921-930, 2012.
C. E. Grover, Salmon, A., and Wendel, J. F., “Targeted sequence capture as a powerful tool for evolutionary analysis1”, American journal of botany, vol. 99, no. 2, pp. 312-319, 2012.
R. A. Moranz, Debinski, D. M., McGranahan, D. A., Engle, D. M., and Miller, J. R., “Untangling the effects of fire, grazing, and land-use legacies on grassland butterfly communities”, Biodiversity and Conservation, vol. 21, no. 11, pp. 2719-2746, 2012.
2011
F. C. Pillsbury, Miller, J. R., Debinski, D. M., and Engle, D. M., “Another tool in the toolbox? Using fire and grazing to promote bird diversity in highly fragmented landscapes”, Ecosphere, vol. 2, no. 3, p. art28, 2011.
J. Zhang, Loynachan, T. E., and Raich, J. W., “Artificial soils to assess temperature sensitivity of the decomposition of model organic compounds: effects of chemical recalcitrance and clay‐mineral composition”, European Journal of Soil Science, vol. 62, no. 6, pp. 863-873, 2011.
B. J. Wilsey, Daneshgar, P. P., and H Polley, W., “Biodiversity, phenology and temporal niche differences between native-and novel exotic-dominated grasslands”, Perspectives in Plant Ecology, Evolution and Systematics, vol. 13, no. 4, pp. 265-276, 2011.
N. Valenzuela and Adams, D. C., “Chromosome number and sex determination coevolve in turtles”, Evolution, vol. 65, no. 6, pp. 1808-1813, 2011.
A. N. Pairett and Serb, J. M., “Comparative transcriptomics: A study using the mirror eye of the scallop, Argopecten irradians”, INTEGRATIVE AND COMPARATIVE BIOLOGY, vol. 51. OXFORD UNIV PRESS INC JOURNALS DEPT, 2001 EVANS RD, CARY, NC 27513 USA, pp. E234-E234, 2011.
J. M. Orlofske, Ohnesorg, W. J., and Debinski, D. M., “A comparison of the arthropod communities in remnant, restored, and reconstructed Iowa tallgrass prairies”, Natural Areas Journal, vol. 31, no. 2, pp. 148-155, 2011.
F. Jeltsch, Moloney, K. A., Schwager, M., Körner, K., and Blaum, N., “Consequences of correlations between habitat modifications and negative impact of climate change for regional species survival”, Agriculture, ecosystems & environment, vol. 145, no. 1, pp. 49-58, 2011.
A. Alejandrino, Puslednik, L., and Serb, J. M., “Convergent and parallel evolution in life habit of the scallops (Bivalvia: Pectinidae)”, BMC Evolutionary Biology, vol. 11, no. 1, p. 164, 2011.
D. M. Debinski, Moranz, R. A., Delaney, J. T., Miller, J. R., Engle, D. M., Winkler, L. B., McGranahan, D. A., Barney, R. J., Trager, J. C., and Stephenson, A. L., “A cross-taxonomic comparison of insect responses to grassland management and land-use legacies”, Ecosphere, vol. 2, no. 12, p. art131, 2011.
M. Sieck, Ibisch, P. L., Moloney, K. A., and Jeltsch, F., “Current models broadly neglect specific needs of biodiversity conservation in protected areas under climate change”, BMC ecology, vol. 11, no. 1, p. 12, 2011.
E. - W. Tian, Yu, H. U. I., Zhang, D. - Y., and Nason, J. D., “Development of microsatellite loci for Blastophaga javana (Agaonidae), the pollinating wasp of Ficus hirta (Moraceae)”, American journal of botany, vol. 98, no. 2, pp. e41-e43, 2011.
V. D. Picasso, E Brummer, C., Liebman, M., Dixon, P. M., and Wilsey, B. J., “Diverse perennial crop mixtures sustain higher productivity over time based on ecological complementarity”, Renewable Agriculture and Food Systems, vol. 26, no. 04, pp. 317-327, 2011.
D. C. Adams and Church, J. O., “The evolution of large‐scale body size clines in Plethodon salamanders: evidence of heat‐balance or species‐specific artifact?”, Ecography, vol. 34, no. 6, pp. 1067-1075, 2011.
J. A. Sherwood and Debinski, D. M., “An Examination of Interannual Population Variation in Parnassius Clodius Butterflies”, University of Wyoming National Park Service Research Center Annual Report, vol. 34, no. 1, pp. 121-123, 2011.
G. Hu, Houston, N. L., Pathak, D., Schmidt, L., Thelen, J. J., and Wendel, J. F., “Genomically biased accumulation of seed storage proteins in allopolyploid cotton”, Genetics, vol. 189, no. 3, pp. 1103-1115, 2011.
C. L. Richards and Wendel, J. F., “The hairy problem of epigenetics in evolution”, New Phytologist, vol. 191, no. 1, pp. 7-9, 2011.
F. Isbell, Calcagno, V., Hector, A., Connolly, J., W Harpole, S., Reich, P. B., Scherer-Lorenzen, M., Schmid, B., Tilman, D., and van Ruijven, J., “High plant diversity is needed to maintain ecosystem services”, Nature, vol. 477, no. 7363, pp. 199-202, 2011.
J. Dewoody, Nason, J. D., and Smith, M., “Hybridization between the threatened herb Boltonia decurrens (Asteraceae) and its widespread congener, B. asteroides”, Botany, vol. 89, no. 3, pp. 191-201, 2011.
F. I. Isbell and Wilsey, B. J., “Increasing native, but not exotic, biodiversity increases aboveground productivity in ungrazed and intensely grazed grasslands”, Oecologia, vol. 165, no. 3, pp. 771-781, 2011.
J. M. Serb, Alejandrino, A., OTÁROLA‐CASTILLO, E. R. I. K., and Adams, D. C., “Morphological convergence of shell shape in distantly related scallop species (Mollusca: Pectinidae)”, Zoological Journal of the Linnean Society, vol. 163, no. 2, pp. 571-584, 2011.
D. C. Adams, Cardini, A., Monteiro, L. R., O'Higgins, P., and Rohlf, F. J., “Morphometrics and phylogenetics: principal components of shape from cranial modules are neither appropriate nor effective cladistic characters”, Journal of Human Evolution, vol. 60, no. 2, pp. 240-243, 2011.
X. Zhang, Serb, J. M., and M Greenlee, H. West, “Mouse retinal development: a dark horse model for systems biology research”, Bioinformatics and biology insights, vol. 5, p. 99, 2011.
Y. Bao, Hu, G., Flagel, L. E., Salmon, A., Bezanilla, M., Paterson, A. H., Wang, Z., and Wendel, J. F., “Parallel up-regulation of the profilin gene family following independent domestication of diploid and allopolyploid cotton (Gossypium)”, Proceedings of the National Academy of Sciences, vol. 108, no. 52, pp. 21152-21157, 2011.
T. J. Hovick, Miller, J. R., Koford, R. R., Engle, D. M., and Debinski, D. M., “Postfledging survival of grasshopper sparrows in grasslands managed with fire and grazing”, The Condor, vol. 113, no. 2, pp. 429-437, 2011.
D. C. Adams, “Quantitative genetics and evolution of head shape in Plethodon salamanders”, Evolutionary Biology, vol. 38, no. 3, pp. 278-286, 2011.
F. I. Isbell and Wilsey, B. J., “Rapid biodiversity declines in both ungrazed and intensely grazed exotic grasslands”, Plant Ecology, vol. 212, no. 10, pp. 1663-1674, 2011.
A. J. Krause, Pairett, A. N., and Serb, J. M., “The role of gene duplication and convergence in the molecular evolution of scallop opsins”, INTEGRATIVE AND COMPARATIVE BIOLOGY, vol. 51. OXFORD UNIV PRESS INC JOURNALS DEPT, 2001 EVANS RD, CARY, NC 27513 USA, pp. E73-E73, 2011.
M. Yoon Chung, Nason, J. D., and Chung, M. Gi, “Significant demographic and fine-scale genetic structure in expanding and senescing populations of the terrestrial orchid Cymbidium goeringii (Orchidaceae)”, American journal of botany, vol. 98, no. 12, pp. 2027-2039, 2011.
J. A. Sherwood, Debinski, D. M., and Germino, M. J., “Testing the Effects of Simulated Climate Change Effects Using Open Sided Warming Chambers”, University of Wyoming National Park Service Research Center Annual Report, vol. 33, no. 1, pp. 147-153, 2011.
2010
F. C. Pillsbury, Miller, J. R., Debinski, D. M., and Engle, D. M., “AVIAN COMMUNITY STRUCTURE IN FRAGMENTED GRASSLANDS MANAGED USING A FIRE-GRAZING INTERACTION”, Grassland bird responses to a fire-grazing interaction in a fragmented landscape, p. 5, 2010.
C. M. Berns and Adams, D. C., “Bill shape and sexual shape dimorphism between two species of temperate hummingbirds: Black-Chinned hummingbird (Archilochus alexandri) and Ruby-Throated hummingbird (A. colubris)”, The Auk, vol. 127, no. 3, pp. 626-635, 2010.
E. S. A. Home, “Carbon Dynamics in the Tropics”, 2010.
R. M. Maher, Asbjornsen, H., Kolka, R. K., Cambardella, C. A., and Raich, J. W., “Changes in soil respiration across a chronosequence of tallgrass prairie reconstructions”, Agriculture, ecosystems & environment, vol. 139, no. 4, pp. 749-753, 2010.

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