Publications

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2007
D. C. Adams and Cerney, M. M., Quantifying biomechanical motion using Procrustes motion analysis, Journal of biomechanics, vol. 40, no. 2, pp. 437-444, 2007.
J. S. Hawkins, Rapp, R. A., and Wendel, J. F., Rapid DNA loss as a counterbalance to retrotransposon proliferation in plant genome size evolution, Transposable Elements and Genome Size Dynamics in Gossypium, p. 61, 2007.
M. Yoon Chung and Nason, J. D., Spatial demographic and genetic consequences of harvesting within populations of the terrestrial orchid Cymbidium goeringii, Biological conservation, vol. 137, no. 1, pp. 125-137, 2007.
W. H Polley, Wilsey, B. J., and Tischler, C. R., Species abundances influence the net biodiversity effect in mixtures of two plant species, Basic and applied ecology, vol. 8, no. 3, pp. 209-218, 2007.
B. Wilsey and Stirling, G., Species richness and evenness respond in a different manner to propagule density in developing prairie microcosm communities, Plant Ecology, vol. 190, no. 2, pp. 259-273, 2007.
J. A. Udall, Flagel, L. E., Cheung, F., Woodward, A. W., Hovav, R., Rapp, R. A., Swanson, J. M., Lee, J. J., Gingle, A. R., and Nettleton, D., Spotted cotton oligonucleotide microarrays for gene expression analysis, Bmc Genomics, vol. 8, no. 1, p. 81, 2007.
C. E. Grover, Hawkins, J. S., and Wendel, J. F., Tobacco genomes quickly go up in smoke, New Phytologist, vol. 175, no. 4, pp. 599-602, 2007.
J. Z Chen, Scheffler, B. E., Dennis, E., Triplett, B. A., Zhang, T., Guo, W., Chen, X., Stelly, D. M., Rabinowicz, P. D., and Town, C. D., Toward sequencing cotton (Gossypium) genomes, Plant physiology, vol. 145, no. 4, pp. 1303-1310, 2007.
A. E. Russell, Raich, J. W., Valverde-Barrantes, O. J., and Fisher, R. F., Tree species effects on soil properties in experimental plantations in tropical moist forest, Soil Science Society of America Journal, vol. 71, no. 4, pp. 1389-1397, 2007.
2008
D. C. Adams and Church, J. O., Amphibians do not follow Bergmann's rule, Evolution, vol. 62, no. 2, pp. 413-420, 2008.
J. D. Davis, Hendrix, S. D., Debinski, D. M., and Hemsley, C. J., Butterfly, bee and forb community composition and cross-taxon incongruence in tallgrass prairie fragments, Journal of Insect Conservation, vol. 12, no. 1, pp. 69-79, 2008.
J. C. Caruthers and Debinski, D. M., CHAPTER THREE: BUTTERFLY RESPONSES TO FLORAL AND HOST PLANT RESOURCES IN MONTANE MEADOWS, Butterfly Community Temporal Trends and Responses to Resource Availability Along a Hydrologic Gradient of Montane Meadows, p. 30, 2008.
J. C. Caruthers, Debinski, D. M., and Whickam, H., CHAPTER TWO: BUTTERFLY INDICATORS OF MONTANE MEADOWS ALONG A HYDROLOGICAL GRADIENT: RESPONSES FROM A SPATIAL AND TEMPORAL SCALE, Butterfly Community Temporal Trends and Responses to Resource Availability Along a Hydrologic Gradient of Montane Meadows, p. 8, 2008.
J. M. Serb and Eernisse, D. J., Charting evolution’s trajectory: using molluscan eye diversity to understand parallel and convergent evolution, Evolution: Education and Outreach, vol. 1, no. 4, pp. 439-447, 2008.
M. Dornbush, Cambardella, C., Ingham, E., and Raich, J., A comparison of soil food webs beneath C3-and C4-dominated grasslands, Biology and Fertility of Soils, vol. 45, no. 1, pp. 73-81, 2008.
J. M. Serb and M Barnhart, C., Congruence and Conflict Between Molecular and Reproductive Characters When Assessing Biological Diversity in the Western Fanshell Cyprogenia aberti (Bivalvia, Unionidae) 1, Annals of the Missouri Botanical Garden, vol. 95, no. 2, pp. 248-261, 2008.
D. M. Debinski and Cross, M. S., Conservation and Global Climate Change, 2008.
D. Allen McGranahan, Engle, D. M., Harr, R. N., Miller, J. R., and Debinski, D. M., COS 73-5: The ecological oddity of an invasive Eurasian grass that lengthens fire-return interval, The 93rd ESA Annual Meeting, 2008.
V. D. Picasso, E Brummer, C., Liebman, M., Dixon, P. M., and Wilsey, B. J., Crop species diversity affects productivity and weed suppression in perennial polycultures under two management strategies, Crop Science, vol. 48, no. 1, pp. 331-342, 2008.
K. Schiffers, Schurr, F. M., Tielbörger, K., Urbach, C., Moloney, K., and Jeltsch, F., Dealing with virtual aggregation–a new index for analysing heterogeneous point patterns, Ecography, vol. 31, no. 5, pp. 545-555, 2008.
C. R. Olson, Vleck, C. M., and Adams, D. C., Decoupling morphological development from growth in periodically cooled zebra finch embryos, Journal of morphology, vol. 269, no. 7, pp. 875-883, 2008.
K. Halverson, Heard, S. B., Nason, J. D., and III, J. O. Stireman, Differential attack on diploid, tetraploid, and hexaploid Solidago altissima L. by five insect gallmakers, Oecologia, vol. 154, no. 4, pp. 755-761, 2008.
F. I. Isbell, Losure, D. A., Yurkonis, K. A., and Wilsey, B. J., Diversity–productivity relationships in two ecologically realistic rarity–extinction scenarios, Oikos, vol. 117, no. 7, pp. 996-1005, 2008.
L. Flagel, Udall, J., Nettleton, D., and Wendel, J. F., Duplicate gene expression in allopolyploid Gossypium reveals two temporally distinct phases of expression evolution, BMC biology, vol. 6, no. 1, p. 16, 2008.
K. Anne Yurkonis, Wilsey, B. J., and Moloney, K. A., The Effect of Plant Distribution on Diversity and Exotic Species Invasion in Prairie Restoration, 2008.
W. A. Robinson and Debinski, D. M., Epigaeic Ant Communities Along a Soil Moisture Gradient in Grand Teton Montane Meadows, University of Wyoming National Park Service Research Center Annual Report, vol. 31, no. 1, pp. 135-140, 2008.
R. Hovav, Udall, J. A., Chaudhary, B., Hovav, E., Flagel, L., Hu, G., and Wendel, J. F., The evolution of spinnable cotton fiber entailed prolonged development and a novel metabolism, PLoS Genet, vol. 4, no. 2, p. e25, 2008.
J. J. Doyle, Flagel, L. E., Paterson, A. H., Rapp, R. A., Soltis, D. E., Soltis, P. S., and Wendel, J. F., Evolutionary genetics of genome merger and doubling in plants, Annual review of genetics, vol. 42, pp. 443-461, 2008.
B. Chaudhary, Hovav, R., Rapp, R., Verma, N., Udall, J. A., and Wendel, J. F., Global analysis of gene expression in cotton fibers from wild and domesticated Gossypium barbadense, Evolution & development, vol. 10, no. 5, pp. 567-582, 2008.
T. L. Dickson, Wilsey, B. J., Busby, R. R., and Gebhart, D. L., Grassland plant composition alters vehicular disturbance effects in Kansas, USA, Environmental management, vol. 41, no. 5, pp. 676-684, 2008.
D. C. Campbell, Johnson, P. D., Williams, J. D., Rindsberg, A. K., Serb, J. M., Small, K. K., and Lydeard, C., Identification of ‘extinct’freshwater mussel species using DNA barcoding, Molecular Ecology Resources, vol. 8, no. 4, pp. 711-724, 2008.
J. Deitloff, Adams, D. C., Olechnowski, B. F. M., and Jaeger, R. G., Interspecific aggression in Ohio Plethodon: implications for competition, Herpetologica, vol. 64, no. 2, pp. 180-188, 2008.
J. M. Serb, Introduction to the Symposium “Molluscan Models: Advancing Our Understanding of the Eye”*, American Malacological Bulletin, vol. 26, no. 1/2, pp. 1-2, 2008.
R. Hovav, Udall, J. A., Hovav, E., Rapp, R., Flagel, L., and Wendel, J. F., A majority of cotton genes are expressed in single-celled fiber, Planta, vol. 227, no. 2, pp. 319-329, 2008.
L. Puslednik and Serb, J. M., Molecular phylogenetics of the Pectinidae (Mollusca: Bivalvia) and effect of increased taxon sampling and outgroup selection on tree topology, Molecular Phylogenetics and Evolution, vol. 48, no. 3, pp. 1178-1188, 2008.
E. M. Myers and Adams, D. C., Morphology is decoupled from interspecific competition in Plethodon salamanders in the Shenandoah Mountains, USA, Herpetologica, vol. 64, no. 3, pp. 281-289, 2008.
D. Berner, Adams, D. C., GRANDCHAMP, A. ‐C., and Hendry, A. P., Natural selection drives patterns of lake–stream divergence in stickleback foraging morphology, Journal of evolutionary biology, vol. 21, no. 6, pp. 1653-1665, 2008.
K. Halverson, Heard, S. B., Nason, J. D., and Stireman, J. O., Origins, distribution, and local co-occurrence of polyploid cytotypes in Solidago altissima (Asteraceae), American Journal of Botany, vol. 95, no. 1, pp. 50-58, 2008.
R. Hovav, Chaudhary, B., Udall, J. A., Flagel, L., and Wendel, J. F., Parallel domestication, convergent evolution and duplicated gene recruitment in allopolyploid cotton, Genetics, vol. 179, no. 3, pp. 1725-1733, 2008.
R. Hovav, Udall, J. A., Chaudhary, B., Rapp, R., Flagel, L., and Wendel, J. F., Partitioned expression of duplicated genes during development and evolution of a single cell in a polyploid plant, Proceedings of the National Academy of Sciences, vol. 105, no. 16, pp. 6191-6195, 2008.
C. E. Grover, Yu, Y., Wing, R. A., Paterson, A. H., and Wendel, J. F., A phylogenetic analysis of indel dynamics in the cotton genus, Molecular Biology and Evolution, vol. 25, no. 7, pp. 1415-1428, 2008.
C. Grover, Hawkins, J., and Wendel, J. F., Phylogenetic insights into the pace and pattern of plant genome size evolution, 2008.
D. C. Adams, Phylogenetic meta‐analysis, Evolution, vol. 62, no. 3, pp. 567-572, 2008.
L. E. Flagel, Rapp, R. A., Grover, C. E., Widrlechner, M. P., Hawkins, J., Grafenberg, J. L., Álvarez, I., Chung, G. Young, and Wendel, J. F., Phylogenetic, morphological, and chemotaxonomic incongruence in the North American endemic genus Echinacea, American journal of botany, vol. 95, no. 6, pp. 756-765, 2008.
J. S. Hawkins, Grover, C. E., and Wendel, J. F., Repeated big bangs and the expanding universe: Directionality in plant genome size evolution, Plant Science, vol. 174, no. 6, pp. 557-562, 2008.
J. M. Calabrese, Ries, L., Matter, S. F., Debinski, D. M., Auckland, J. N., Roland, J., and Fagan, W. F., Reproductive asynchrony in natural butterfly populations and its consequences for female matelessness, Journal of Animal Ecology, vol. 77, no. 4, pp. 746-756, 2008.
B. F. M. Olechnowski and Debinski, D. M., Response of songbirds to riparian willow habitat structure in the Greater Yellowstone Ecosystem, The Wilson Journal of Ornithology, vol. 120, no. 4, pp. 830-839, 2008.
R. C. Garrick, Meadows, C. A., Nicolas, A. N., Nason, J. D., and Dyer, R. J., A set of polymorphic nuclear intron markers for conservation genetics and phylogeography of Euphorbia species (Pedilanthus clade), Conservation Genetics, vol. 9, no. 6, pp. 1673-1676, 2008.
K. A. Moloney and Jeltsch, F., Space matters–Novel developments in plant ecology through spatial modelling, Perspectives in Plant Ecology, Evolution and Systematics, vol. 9, no. 3, pp. 119-120, 2008.
F. Jeltsch, Moloney, K. A., Schurr, F. M., Köchy, M., and Schwager, M., The state of plant population modelling in light of environmental change, Perspectives in Plant Ecology, Evolution and Systematics, vol. 9, no. 3, pp. 171-189, 2008.

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