Publications

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Book Chapter
D. C. Adams and Naylor, G. J. P., A Comparison of Methods for Assessing the Structural Similarity of Proteins, in Mathematical Methods for Protein Structure Analysis and Design, Springer Berlin Heidelberg, 2003, pp. 109-115.
D. C. Adams, Divergence of trophic morphology and resource use among populations of Plethodon cinereus and P. hoffmani in Pennsylvania, in The biology of Plethodontid salamanders, Springer US, 2000, pp. 383-394.
Conference Proceedings
D. Ashlock, Adams, D. C., and Doty, D., Morphometric grayscale texture analysis using foot patterns, Evolutionary Computation, 2003. CEC'03. The 2003 Congress on, vol. 3. IEEE, pp. 1575-1581, 2003.
Journal Article
J. F. Jackson, Adams, D. C., and Jackson, U. B., Allometry of constitutive defense: a model and a comparative test with tree bark and fire regime, The American Naturalist, vol. 153, no. 6, pp. 614-632, 1999.
D. C. Adams and Church, J. O., Amphibians do not follow Bergmann's rule, Evolution, vol. 62, no. 2, pp. 413-420, 2008.
D. C. Adams and Collyer, M. L., Analysis of character divergence along environmental gradients and other covariates, Evolution, vol. 61, no. 3, pp. 510-515, 2007.
M. L. Collyer and Adams, D. C., Analysis of two-state multivariate phenotypic change in ecological studies, Ecology, vol. 88, no. 3, pp. 683-692, 2007.
P. G. HARNIK, Serb, J. M., Adams, D. C., RIEMANN, R., and SMITH, T., ARE CHANGING ENVIRONMENTS REFLECTED IN THE MORPHOLOGICAL DISPARITY OF FOSSIL AND RECENT SCALLOPS FROM THE TROPICAL AMERICAS?, 2014 GSA Annual Meeting in Vancouver, British Columbia, 2014.
D. C. Adams, Berns, C. M., Kozak, K. H., and Wiens, J. J., Are rates of species diversification correlated with rates of morphological evolution?, Proceedings of the Royal Society of London B: Biological Sciences, p. rspb. 2009.0543, 2009.
G. J. P. Naylor and Adams, D. C., Are the fossil data really at odds with the molecular data? Morphological evidence for Cetartiodactyla phylogeny reexamined, Systematic Biology, pp. 444-453, 2001.
D. C. Adams and Felice, R. N., Assessing trait covariation and morphological integration on phylogenies using evolutionary covariance matrices, PloS one, vol. 9, no. 4, p. e94335, 2014.
D. C. Adams, Di Bitetti, M. S., Janson, C. H., Slobodkin, L. B., and Valenzuela, N., An" audience effect" for ecological terminology: use and misuse of jargon, Oikos, pp. 632-636, 1997.
A. C. Kraemer, Serb, J. M., and Adams, D. C., Batesian mimics influence the evolution of conspicuousness in an aposematic salamander, Journal of evolutionary biology, 2015.
C. M. Berns and Adams, D. C., Becoming different but staying alike: patterns of sexual size and shape dimorphism in bills of hummingbirds, Evolutionary Biology, vol. 40, no. 2, pp. 246-260, 2013.
C. M. Berns and Adams, D. C., Bill shape and sexual shape dimorphism between two species of temperate hummingbirds: Black-Chinned hummingbird (Archilochus alexandri) and Ruby-Throated hummingbird (A. colubris), The Auk, vol. 127, no. 3, pp. 626-635, 2010.
S. Arif, Adams, D. C., and Wicknick, J. A., Bioclimatic modelling, morphology, and behaviour reveal alternative mechanisms regulating the distributions of two parapatric salamander species, Evolutionary Ecology Research, vol. 9, no. 5, pp. 843-854, 2007.
D. D. Kassam, Adams, D. C., Ambali, A. J. D., and Yamaoka, K., Body shape variation in relation to resource partitioning within cichlid trophic guilds coexisting along the rocky shore of Lake Malawi, Animal Biology, vol. 53, no. 1, pp. 59-70, 2003.
R. G. Jaeger, Prosen, E. D., Adams, D. C., and Montgomery, W. L., Character Displacement and Aggression in Two Species ofTerrestrial Salamanders, Copeia, vol. 2002, no. 2, pp. 391-401, 2002.
D. C. Adams, Character displacement via aggressive interference in Appalachian salamanders, Ecology, vol. 85, no. 10, pp. 2664-2670, 2004.
N. Valenzuela and Adams, D. C., Chromosome number and sex determination coevolve in turtles, Evolution, vol. 65, no. 6, pp. 1808-1813, 2011.
D. C. Adams, Comparing evolutionary rates for different phenotypic traits on a phylogeny using likelihood, Systematic biology, p. sys083, 2012.
D. C. Adams and Collyer, M. L., On the comparison of the strength of morphological integration across morphometric datasets, Evolution, 2016.
J. Deitloff, Petersen, J. D., and Adams, D. C., Complex species interactions lead to unpredictable outcomes in Plethodon, Herpetologica, vol. 69, no. 1, pp. 1-10, 2013.
C. R. Olson, Vleck, C. M., and Adams, D. C., Decoupling morphological development from growth in periodically cooled zebra finch embryos, Journal of morphology, vol. 269, no. 7, pp. 875-883, 2008.
M. L. Cayuela, Aguilera, E., Sanz-Cobena, A., Adams, D. C., Abalos, D., Barton, L., Ryals, R., Silver, W. L., Alfaro, M. A., and Pappa, V. A., Direct nitrous oxide emissions in Mediterranean climate cropping systems: Emission factors based on a meta-analysis of available measurement data, Agriculture, Ecosystems & Environment, 2016.
T. Escalona, Valenzuela, N., and Adams, D. C., Do Local Environmental Factors and Lunar Cycle Influence Timing and Synchrony of Oviposition of a Turtle with Strict Nocturnal Nesting?, Diversity, vol. 11, no. 5, p. 78, 2019.
O. Fedrigo, Adams, D. C., and Naylor, G. J. P., DRUIDS—Detection of regions with unexpected internal deviation from stationarity, Journal of Experimental Zoology Part B: Molecular and Developmental Evolution, vol. 304, no. 2, pp. 119-128, 2005.
D. C. Adams and F Rohlf, J., Ecological character displacement in Plethodon: biomechanical differences found from a geometric morphometric study, Proceedings of the National Academy of Sciences, vol. 97, no. 8, pp. 4106-4111, 2000.
D. C. Adams and Jackson, J. F., Estimating the allometry of tree bark, American Midland Naturalist, pp. 99-106, 1995.
D. C. Adams, Evaluating modularity in morphometric data: challenges with the RV coefficient and a new test measure, Methods in Ecology and Evolution, 2015.
J. Hollander, Adams, D. C., and Johannesson, K., Evolution of adaptation through allometric shifts in a marine snail, Evolution, vol. 60, no. 12, pp. 2490-2497, 2006.
D. C. Adams and Church, J. O., The evolution of large‐scale body size clines in Plethodon salamanders: evidence of heat‐balance or species‐specific artifact?, Ecography, vol. 34, no. 6, pp. 1067-1075, 2011.
D. Outomuro, Adams, D. C., and Johansson, F., The evolution of wing shape in ornamented-winged damselflies (Calopterygidae, Odonata), Evolutionary biology, vol. 40, no. 2, pp. 300-309, 2013.
J. Bohórquez-Herrera, Cruz-Escalona, V. H., Adams, D. C., and Peterson, M. S., Feeding ecomorphology of seven demersal marine fish species in the Mexican Pacific Ocean, Environmental Biology of Fishes, vol. 98, no. 5, pp. 1459-1473, 2015.
D. C. Adams, F Rohlf, J., and Slice, D. E., A field comes of age: geometric morphometrics in the 21st century, Hystrix, the Italian journal of Mammalogy, vol. 24, no. 1, pp. 7-14, 2013.
D. Kassam, Adams, D. C., and Yamaoka, K., Functional significance of variation in trophic morphology within feeding microhabitat-differentiated cichlid species in Lake Malawi, Animal biology, vol. 54, no. 1, pp. 77-90, 2004.
P. Piras, Colangelo, P., Adams, D. C., Buscalioni, A., Cubo, J., Kotsakis, T., Meloro, C., and Raia, P., The Gavialis–Tomistoma debate: the contribution of skull ontogenetic allometry and growth trajectories to the study of crocodylian relationships, Evolution & development, vol. 12, no. 6, pp. 568-579, 2010.
D. C. Adams and Collyer, M. L., A general framework for the analysis of phenotypic trajectories in evolutionary studies, Evolution, vol. 63, no. 5, pp. 1143-1154, 2009.
D. C. Adams, A generalized K statistic for estimating phylogenetic signal from shape and other high-dimensional multivariate data, Systematic biology, vol. 63, no. 5, pp. 685-697, 2014.
N. Valenzuela, Adams, D. C., Bowden, R. M., Gauger, A. C., and Douglas, M. E., Geometric morphometric sex estimation for hatchling turtles: a powerful alternative for detecting subtle sexual shape dimorphism, Copeia, vol. 2004, no. 4, pp. 735-742, 2004.
D. C. Adams, F Rohlf, J., and Slice, D. E., Geometric morphometrics: ten years of progress following the ‘revolution’, Italian Journal of Zoology, vol. 71, no. 1, pp. 5-16, 2004.
D. C. Adams and OTÁROLA‐CASTILLO, E. R. I. K., geomorph: an R package for the collection and analysis of geometric morphometric shape data, Methods in Ecology and Evolution, vol. 4, no. 4, pp. 393-399, 2013.
D. C. Adams and Beachy, C. K., Historical explanations of phenotypic variation in the plethodontid salamander Gyrinophilus porphyriticus, Herpetologica, pp. 353-364, 2001.
K. M. Butterworth, Adams, D. C., Horner, H. T., and Wendel, J. F., Initiation and early development of fiber in wild and cultivated cotton, International Journal of Plant Sciences, vol. 170, no. 5, pp. 561-574, 2009.
J. Deitloff, Adams, D. C., Olechnowski, B. F. M., and Jaeger, R. G., Interspecific aggression in Ohio Plethodon: implications for competition, Herpetologica, vol. 64, no. 2, pp. 180-188, 2008.
J. Deitloff, Church, J. O., Adams, D. C., and Jaeger, R. G., Interspecific agonistic behaviors in a salamander community: Implications for alpha selection, Herpetologica, vol. 65, no. 2, pp. 174-182, 2009.
C. D. Kelly, Folinsbee, K. E., Adams, D. C., and Jennions, M. D., Intraspecific sexual size and shape dimorphism in an Australian freshwater fish differs with respect to a biogeographic barrier and latitude, Evolutionary Biology, vol. 40, no. 3, pp. 408-419, 2013.
A. Loy, Corti, M., Adams, D. C., Slice, D. E., and F Rohlf, J., Introduction to the proceedings of the Rome 2002 Geometric Morphometrics workshop. Homage to Leslie F. Marcus, 2004.

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